RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 ZNF540Q8NDQ6 660 aa7.84□□□□□ -1.15
CMTM1-210ENST00000528441 OR10H5Q8NGA6 315 aa7.84□□□□□ -1.15
CMTM1-210ENST00000528441 OR1J1Q8NGS3 322 aa7.84□□□□□ -1.15
CMTM1-210ENST00000528441 AKR7LQ8NHP1 331 aa7.84□□□□□ -1.15
CMTM1-210ENST00000528441 FGFBP3Q8TAT2 258 aa7.84□□□□□ -1.15
CMTM1-210ENST00000528441 SYNPRQ8TBG9 265 aa7.84□□□□□ -1.15
CMTM1-210ENST00000528441 C10orf105Q8TEF2 133 aa7.84□□□□□ -1.15
CMTM1-210ENST00000528441 UBASH3BQ8TF42 649 aa7.84□□□□□ -1.15
CMTM1-210ENST00000528441 Q96M85 177 aa7.84□□□□□ -1.15
CMTM1-210ENST00000528441 FOXN4Q96NZ1 517 aa7.84□□□□□ -1.15
CMTM1-210ENST00000528441 MRPL37Q9BZE1 423 aaKnown RBP7.84□□□□□ -1.15
CMTM1-210ENST00000528441 MS4A5Q9H3V2 200 aa7.84□□□□□ -1.15
CMTM1-210ENST00000528441 ANKRD19PQ9H560 264 aa7.84□□□□□ -1.15
CMTM1-210ENST00000528441 NARFLQ9H6Q4 476 aa7.84□□□□□ -1.15
CMTM1-210ENST00000528441 SIAEQ9HAT2 523 aa7.84□□□□□ -1.15
CMTM1-210ENST00000528441 DCAF13Q9NV06 445 aaKnown RBP7.84□□□□□ -1.15
CMTM1-210ENST00000528441 B3GNT2Q9NY97 397 aa7.84□□□□□ -1.15
CMTM1-210ENST00000528441 TAAR3PQ9P1P4 343 aa7.84□□□□□ -1.15
CMTM1-210ENST00000528441 PLSCR5A0PG75 271 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 C12orf71A8MTZ7 269 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 A8MV72 311 aaPredicted RBP7.83□□□□□ -1.16
CMTM1-210ENST00000528441 NDUFS8O00217 210 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 FFAR1O14842 300 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 SYNGR3O43761 229 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 TLX2O43763 284 aaPredicted RBP7.83□□□□□ -1.16
CMTM1-210ENST00000528441 CD5LO43866 347 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 DOK2O60496 412 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 PPP1R3DO95685 299 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 RENP00797 406 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 HLA-DQA2P01906 255 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 CD14P08571 375 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 NAT2P11245 290 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 MSR1P21757 451 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 STOMP27105 288 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 LAP3P28838 519 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 RRM2P31350 389 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 HTR5AP47898 357 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 GZMKP49863 264 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 MRPS34P82930 218 aaKnown RBP7.83□□□□□ -1.16
CMTM1-210ENST00000528441 MOGQ16653 247 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 MST1LQ2TV78 715 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 TMEM249Q2WGJ8 235 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 SPATA46Q5T0L3 261 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 C10orf128Q5T292 105 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 ARMC4Q5T2S8 1044 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 CYB5R2Q6BCY4 276 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 C1orf94Q6P1W5 598 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 C8orf82Q6P1X6 216 aaPredicted RBP7.83□□□□□ -1.16
CMTM1-210ENST00000528441 ZDHHC21Q8IVQ6 265 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 ARIH2OSQ8N7S6 290 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 OR52L1Q8NGH7 329 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 ABHD4Q8TB40 342 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 LIPHQ8WWY8 451 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 CCDC124Q96CT7 223 aaKnown RBP7.83□□□□□ -1.16
CMTM1-210ENST00000528441 RASD2Q96D21 266 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 NSL1Q96IY1 281 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 ERMAPQ96PL5 475 aaPredicted RBP7.83□□□□□ -1.16
CMTM1-210ENST00000528441 IFT27Q9BW83 186 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 BCL2L14Q9BZR8 327 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 BPESC1Q9GZL8 116 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 SMURF2Q9HAU4 748 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 EMC7Q9NPA0 242 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 MAN2C1Q9NTJ4 1040 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 DECR2Q9NUI1 292 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 NDUFAF4Q9P032 175 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 KCNS2Q9ULS6 477 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 ADAM18Q9Y3Q7 739 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 IER3IP1Q9Y5U9 82 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 CR1P17927 2039 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 VPS13CQ709C8 3753 aa7.83□□□□□ -1.16
CMTM1-210ENST00000528441 ZNF469Q96JG9 3925 aaPredicted RBP7.83□□□□□ -1.16
CMTM1-210ENST00000528441 IGKV1D-43A0A0B4J1Z2 117 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 TRBV4-1A0A0J9YWV2 114 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 LOC100289279A0A1B0GTE1 492 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 A0A1W2PRQ8 180 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 NPIPB13A6NJU9 1138 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 NPIPB4C9JG80 1138 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 CDC42EP2O14613 210 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 MGRN1O60291 552 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 SLC16A7O60669 478 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 KHDRBS3O75525 346 aaKnown RBP7.82□□□□□ -1.16
CMTM1-210ENST00000528441 ABHD16AO95870 558 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 IGHMP01871 453 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 ZNF35P13682 527 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 HSD17B1P14061 328 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 HOXB4P17483 251 aaPredicted RBP7.82□□□□□ -1.16
CMTM1-210ENST00000528441 HNF1AP20823 631 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 SLC6A6P31641 620 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 NR4A2P43354 598 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 GPR6P46095 362 aaPredicted RBP7.82□□□□□ -1.16
CMTM1-210ENST00000528441 ERVS71-1P61550 626 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 LOXL1Q08397 574 aaPredicted RBP7.82□□□□□ -1.16
CMTM1-210ENST00000528441 SCRN3Q0VDG4 424 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 CCNIQ14094 377 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 DGCR6Q14129 220 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 ZNF718Q3SXZ3 478 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 CHRFAM7AQ494W8 412 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 NRN1LQ496H8 165 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 GPR139Q6DWJ6 353 aa7.82□□□□□ -1.16
CMTM1-210ENST00000528441 LEG1Q6P5S2 330 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms