RNA–Protein interactions for RNA: ENST00000527881.1

TSKU-203, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSKU, Length 3,554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-203ENST00000527881 ZPLD1Q8TCW7 415 aa11.34□□□□□ -0.59
TSKU-203ENST00000527881 GPX8Q8TED1 209 aa11.34□□□□□ -0.59
TSKU-203ENST00000527881 MARS2Q96GW9 593 aaKnown RBP11.34□□□□□ -0.59
TSKU-203ENST00000527881 ALG12Q9BV10 488 aa11.34□□□□□ -0.59
TSKU-203ENST00000527881 FBXO34Q9NWN3 711 aa11.34□□□□□ -0.59
TSKU-203ENST00000527881 FRRS1LQ9P0K9 344 aa11.34□□□□□ -0.59
TSKU-203ENST00000527881 CACFD1Q9UGQ2 172 aa11.34□□□□□ -0.59
TSKU-203ENST00000527881 ADAM29Q9UKF5 820 aa11.34□□□□□ -0.59
TSKU-203ENST00000527881 HS3ST2Q9Y278 367 aa11.34□□□□□ -0.59
TSKU-203ENST00000527881 DCDC2BA2VCK2 349 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 BLOC1S5-TXNDC5H3BN57 136 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 STK17BO94768 372 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 OR8U9P0C7N5 309 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 ADRB3P13945 408 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 DVL1P1P54792 670 aaPredicted RBP11.33□□□□□ -0.6
TSKU-203ENST00000527881 EIF5AP63241 154 aaKnown RBP11.33□□□□□ -0.6
TSKU-203ENST00000527881 BTN3A2P78410 334 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 NSUN5P2Q63ZY6 315 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 OR2A2Q6IF42 318 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 ARRDC1Q8N5I2 433 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 ZSCAN4Q8NAM6 433 aaPredicted RBP11.33□□□□□ -0.6
TSKU-203ENST00000527881 TMEM229BQ8NBD8 167 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 OR8U1Q8NH10 309 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 SDF2Q99470 211 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 PRRT1Q99946 306 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 NRSN2Q9GZP1 204 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 AMDHD2Q9Y303 409 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 PUS1Q9Y606 427 aaKnown RBP eCLIP11.33□□□□□ -0.6
TSKU-203ENST00000527881 FAM157CP0CG43 387 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 G0S2P27469 103 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 SULT1A1P50225 295 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 TRA2BP62995 288 aaKnown RBP11.33□□□□□ -0.6
TSKU-203ENST00000527881 SURF2Q15527 256 aaPredicted RBP11.33□□□□□ -0.6
TSKU-203ENST00000527881 RPL7L1Q6DKI1 246 aaKnown RBP11.33□□□□□ -0.6
TSKU-203ENST00000527881 SLC48A1Q6P1K1 146 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 SLC39A5Q6ZMH5 540 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 CXorf40AQ8TE69 158 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 LMAN2LQ9H0V9 348 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 A0A1B0GWA3 101 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 PRR32B1ATL7 298 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 TXNDC12O95881 172 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 DBIP07108 87 aaKnown RBP11.33□□□□□ -0.6
TSKU-203ENST00000527881 ASGR1P07306 291 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 DDTP30046 118 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 GAMTQ14353 236 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 TEX101Q9BY14 249 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 EGLN1Q9GZT9 426 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 PRR13Q9NZ81 148 aa11.33□□□□□ -0.6
TSKU-203ENST00000527881 CGGBP1Q9UFW8 167 aaPredicted RBP11.33□□□□□ -0.6
TSKU-203ENST00000527881 ABT1Q9ULW3 272 aaKnown RBP11.33□□□□□ -0.6
TSKU-203ENST00000527881 PCYT1BQ9Y5K3 369 aaPredicted RBP11.33□□□□□ -0.6
TSKU-203ENST00000527881 A0A087WV62 115 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 UMAD1C9J7I0 102 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 NME2P1O60361 137 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 OR2C1O95371 312 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 HLA-DQA2P01906 255 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 CSNK1G2P78368 415 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 HIST2H3AQ71DI3 136 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 AMZ2Q86W34 360 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 ADAD2Q8NCV1 583 aaKnown RBP11.32□□□□□ -0.6
TSKU-203ENST00000527881 OR13C8Q8NGS7 320 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 CPNE4Q96A23 557 aaPredicted RBP11.32□□□□□ -0.6
TSKU-203ENST00000527881 SAT2Q96F10 170 aaPredicted RBP11.32□□□□□ -0.6
TSKU-203ENST00000527881 URGCP-MRPS24S4R325 110 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 TBC1D3KA0A087X1G2 549 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 TBC1D3BA6NDS4 549 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 TBC1D3FA6NER0 549 aaPredicted RBP11.32□□□□□ -0.6
TSKU-203ENST00000527881 LILRB5O75023 590 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 DUSP11O75319 330 aaKnown RBP11.32□□□□□ -0.6
TSKU-203ENST00000527881 PRH1P02810 166 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 SFTPBP07988 381 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 OR13C7P0DN81 318 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 ZBTB25P24278 435 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 NAAAQ02083 359 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 TEX30Q5JUR7 227 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 GLYATL3Q5SZD4 288 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 TBC1D3GQ6DHY5 549 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 REC114Q7Z4M0 266 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 TGIF2LXQ8IUE1 241 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 ZNF619Q8N2I2 560 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 RAB42Q8N4Z0 105 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 CCDC54Q8NEL0 328 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 OR56B1Q8NGI3 324 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 POM121Q96HA1 1249 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 OR52A5Q9H2C5 316 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 WASF3Q9UPY6 502 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 HEATR5BQ9P2D3 2071 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 TBC1D3DA0A087WVF3 549 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 TBC1D3IA0A087WXS9 549 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 TBC1D3LB9A6J9 549 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 F8VVB4 439 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 F8VWA3 439 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 CLEC3AO75596 197 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 AGR2O95994 175 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 TBC1D3HP0C7X1 549 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 CTSAP10619 480 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 CYCSP99999 105 aaKnown RBP11.32□□□□□ -0.6
TSKU-203ENST00000527881 HMGN3Q15651 99 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 TBC1D3CQ6IPX1 549 aa11.32□□□□□ -0.6
TSKU-203ENST00000527881 DRAM2Q6UX65 266 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms