RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 FXYD6-FXYD2A0A087WZ82 144 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 SLC22A20A6NK97 555 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 ZNF736B4DX44 427 aaPredicted RBP13.62□□□□□ -0.23
USP47-207ENST00000527733 SULT1C4O75897 302 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 SRD5A2P31213 254 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 EGR3Q06889 387 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 METAP1DQ6UB28 335 aaPredicted RBP13.62□□□□□ -0.23
USP47-207ENST00000527733 FXYD6Q9H0Q3 95 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 GSKIPQ9P0R6 139 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 A0A1W2PQM1 296 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 FGF5P12034 268 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 ZNF44P15621 663 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 AP2S1P53680 142 aaPredicted RBP13.62□□□□□ -0.23
USP47-207ENST00000527733 BDH1Q02338 343 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 CLN3Q13286 438 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 B3GNTL1Q67FW5 361 aaPredicted RBP13.62□□□□□ -0.23
USP47-207ENST00000527733 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.62□□□□□ -0.23
USP47-207ENST00000527733 SLC22A24Q8N4F4 322 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 COQ3Q9NZJ6 369 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 APC2O95996 2303 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 CREBL2O60519 120 aaPredicted RBP13.62□□□□□ -0.23
USP47-207ENST00000527733 CD53P19397 219 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 GNRHRP30968 328 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 CX3CR1P49238 355 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 PARP16Q8N5Y8 322 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 CPNE5Q9HCH3 593 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 DYNLRB1Q9NP97 96 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 SLC5A6Q9Y289 635 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 SCGB1D2O95969 90 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 SRMP19623 302 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 RAB2AP61019 212 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 TBC1D28Q2M2D7 210 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 NKAIN3Q8N8D7 197 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 KCNG3Q8TAE7 436 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 MOB1AQ9H8S9 216 aa13.62□□□□□ -0.23
USP47-207ENST00000527733 HSPB2A8KAH6 182 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 SMIM10L1P0DMW3 83 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 S100A10P60903 97 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 RAC1P63000 192 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 FZD5Q13467 585 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 HSPB2Q16082 182 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 NKPD1Q17RQ9 610 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 RTL6Q6ICC9 239 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 VHLLQ6RSH7 139 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 HSD17B8Q92506 261 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 SMIM10Q96HG1 83 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 SLC52A3Q9NQ40 469 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 PCDHGA3Q9Y5H0 932 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 RAF1P04049 648 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 CPEP16870 476 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 ZFP36L2P47974 494 aaKnown RBP13.61□□□□□ -0.23
USP47-207ENST00000527733 MEOX1P50221 254 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 TBRG1Q3YBR2 411 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 LSMEM1Q8N8F7 131 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 LGALS14Q8TCE9 139 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 TMEM59Q9BXS4 323 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 OR10A4Q9H209 315 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 OR14I1A6ND48 311 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 B4DXG7 233 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 CLEC2LP0C7M8 214 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 ZNF93P35789 620 aaPredicted RBP13.61□□□□□ -0.23
USP47-207ENST00000527733 EFNA3P52797 238 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 UBE2NLQ5JXB2 153 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 ARSKQ6UWY0 536 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 DOK3Q7L591 496 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 MRGPREQ86SM8 312 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 C9orf40Q8IXQ3 194 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 OR6V1Q8N148 313 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 PIAS4Q8N2W9 510 aaPredicted RBP13.61□□□□□ -0.23
USP47-207ENST00000527733 OR6M1Q8NGM8 313 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 OR52N5Q8NH56 324 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 LIPHQ8WWY8 451 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 ST6GALNAC5Q9BVH7 336 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 MRPS28Q9Y2Q9 187 aaKnown RBP13.61□□□□□ -0.23
USP47-207ENST00000527733 A3GALT2U3KPV4 340 aa13.61□□□□□ -0.23
USP47-207ENST00000527733 TIMM8AO60220 97 aaPredicted RBP13.6□□□□□ -0.23
USP47-207ENST00000527733 HTR2AP28223 471 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 RHNO1Q9BSD3 238 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 NDUFB11Q9NX14 153 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 KCNN3Q9UGI6 736 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 PROCRQ9UNN8 238 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 CACNG2Q9Y698 323 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 LOC107986453A0A1B0GWG9 222 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 ACBD4Q8NC06 268 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 OR4D11Q8NGI4 311 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 ZNF721Q8TF20 911 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 GUCD1Q96NT3 240 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 SYT3Q9BQG1 590 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 C7orf50Q9BRJ6 194 aaKnown RBP13.6□□□□□ -0.23
USP47-207ENST00000527733 MAN2C1Q9NTJ4 1040 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 A0A1W2PQ09 198 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 M0R135 149 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 TPBGQ13641 420 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 OR56B1Q8NGI3 324 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 OR5D18Q8NGL1 313 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 ZNF799Q96GE5 643 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 DTX4Q9Y2E6 619 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 GPR179Q6PRD1 2367 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 KANTRA0A1W2PQU2 76 aa13.6□□□□□ -0.23
USP47-207ENST00000527733 FFAR1O14842 300 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms