RNA–Protein interactions for RNA: ENST00000526271.2

CPSF1-201, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 3

Gene CPSF1, Length 697 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-201ENST00000526271 FBXL3Q9UKT7 428 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 DOCK11Q5JSL3 2073 aa12.06□□□□□ -0.48
CPSF1-201ENST00000526271 DNAJC9-AS1A6NH13 148 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 M0QX08 132 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 FXYD1O00168 92 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 SPRY3O43610 288 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 TRMUO75648 421 aaKnown RBP12.05□□□□□ -0.48
CPSF1-201ENST00000526271 IGHV2-70P01814 119 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 F13BP05160 661 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 TSPAN19P0C672 248 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 ZNF32P17041 273 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 RPL18Q07020 188 aaKnown RBP12.05□□□□□ -0.48
CPSF1-201ENST00000526271 NFYCQ13952 458 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 C10orf128Q5T292 105 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 ARMC4Q5T2S8 1044 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 SLC16A14Q7RTX9 510 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 DHDDSQ86SQ9 333 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 SYT14Q8NB59 555 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 ICA1LQ8NDH6 482 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 RBM15BQ8NDT2 890 aaKnown RBP12.05□□□□□ -0.48
CPSF1-201ENST00000526271 HIPK4Q8NE63 616 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 NOXO1Q8NFA2 376 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 MOSPD2Q8NHP6 518 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 PFN4Q8NHR9 129 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 NANPQ8TBE9 248 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 SLC25A40Q8TBP6 338 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 C11orf40Q8WZ69 217 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 HDAC2Q92769 488 aaKnown RBP12.05□□□□□ -0.48
CPSF1-201ENST00000526271 RAB39BQ96DA2 213 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 CGREF1Q99674 301 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 SPATA5L1Q9BVQ7 753 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 PCDHAC1Q9H158 963 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 SAP30LQ9HAJ7 183 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 C20orf141Q9NUB4 165 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 SLCO1C1Q9NYB5 712 aa12.05□□□□□ -0.48
CPSF1-201ENST00000526271 CLDN25C9JDP6 229 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 RNF13O43567 381 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 SCG5P05408 212 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 ADH4P08319 380 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 FUT1P19526 365 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 CALB2P22676 271 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 SLC6A2P23975 617 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 RAD52P43351 418 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 ZNF81P51508 661 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 MNAT1P51948 309 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 NCALDP61601 193 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 PSG4Q00888 419 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 TBC1D28Q2M2D7 210 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 NRN1LQ496H8 165 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 PDLIM3Q53GG5 364 aaPredicted RBP12.04□□□□□ -0.48
CPSF1-201ENST00000526271 NANOGP8Q6NSW7 305 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 Q6ZR03 302 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 DOK3Q7L591 496 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 KRT73Q86Y46 540 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 NKAIN4Q8IVV8 208 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 VANGL1Q8TAA9 524 aaPredicted RBP12.04□□□□□ -0.48
CPSF1-201ENST00000526271 KLF14Q8TD94 323 aaPredicted RBP12.04□□□□□ -0.48
CPSF1-201ENST00000526271 CCL17Q92583 94 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 SIGLEC11Q96RL6 698 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 HOPXQ9BPY8 73 aaPredicted RBP12.04□□□□□ -0.48
CPSF1-201ENST00000526271 BCL2L14Q9BZR8 327 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 OR2J1Q9GZK6 312 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 WNT5BQ9H1J7 359 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 RNF121Q9H920 327 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 NANOGQ9H9S0 305 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 NANSQ9NR45 359 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 ZNF229Q9UJW7 825 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 SLC7A7Q9UM01 511 aa12.04□□□□□ -0.48
CPSF1-201ENST00000526271 SLC22A23A1A5C7 686 aa12.03□□□□□ -0.48
CPSF1-201ENST00000526271 PRORSD1PA6NEY8 169 aa12.03□□□□□ -0.48
CPSF1-201ENST00000526271 ANPEPP15144 967 aa12.03□□□□□ -0.48
CPSF1-201ENST00000526271 TNFRSF1BP20333 461 aa12.03□□□□□ -0.48
CPSF1-201ENST00000526271 PPIBP23284 216 aaKnown RBP12.03□□□□□ -0.48
CPSF1-201ENST00000526271 AQP2P41181 271 aa12.03□□□□□ -0.48
CPSF1-201ENST00000526271 ERFP50548 548 aa12.03□□□□□ -0.48
CPSF1-201ENST00000526271 MTPNP58546 118 aa12.03□□□□□ -0.48
CPSF1-201ENST00000526271 FHL1Q13642 323 aa12.03□□□□□ -0.48
CPSF1-201ENST00000526271 SLC36A2Q495M3 483 aa12.03□□□□□ -0.48
CPSF1-201ENST00000526271 FAM209AQ5JX71 171 aa12.03□□□□□ -0.48
CPSF1-201ENST00000526271 MBNL2Q5VZF2 373 aaKnown RBP12.03□□□□□ -0.48
CPSF1-201ENST00000526271 TMEM53Q6P2H8 277 aa12.03□□□□□ -0.48
CPSF1-201ENST00000526271 RANBP3LQ86VV4 465 aaPredicted RBP12.03□□□□□ -0.48
CPSF1-201ENST00000526271 JAZF1Q86VZ6 243 aa12.03□□□□□ -0.48
CPSF1-201ENST00000526271 BPIFB2Q8N4F0 458 aa12.03□□□□□ -0.48
CPSF1-201ENST00000526271 OR8J3Q8NGG0 315 aa12.03□□□□□ -0.48
CPSF1-201ENST00000526271 SNX33Q8WV41 574 aa12.03□□□□□ -0.48
CPSF1-201ENST00000526271 JMJD8Q96S16 334 aa12.03□□□□□ -0.48
CPSF1-201ENST00000526271 MSL2Q9HCI7 577 aa12.03□□□□□ -0.48
CPSF1-201ENST00000526271 POLR3KQ9Y2Y1 108 aaPredicted RBP12.03□□□□□ -0.48
CPSF1-201ENST00000526271 EVPLLA8MZ36 301 aa12.02□□□□□ -0.49
CPSF1-201ENST00000526271 F5H0A9 414 aaPredicted RBP12.02□□□□□ -0.49
CPSF1-201ENST00000526271 ICMTO60725 284 aa12.02□□□□□ -0.49
CPSF1-201ENST00000526271 OR6A2O95222 327 aa12.02□□□□□ -0.49
CPSF1-201ENST00000526271 BCL10O95999 233 aa12.02□□□□□ -0.49
CPSF1-201ENST00000526271 IGHG1P01857 330 aa12.02□□□□□ -0.49
CPSF1-201ENST00000526271 ACADSP16219 412 aa12.02□□□□□ -0.49
CPSF1-201ENST00000526271 ZNF12P17014 697 aa12.02□□□□□ -0.49
CPSF1-201ENST00000526271 PRTN3P24158 256 aa12.02□□□□□ -0.49
CPSF1-201ENST00000526271 STOMP27105 288 aa12.02□□□□□ -0.49
CPSF1-201ENST00000526271 ERVK-25P63136 954 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms