RNA–Protein interactions for RNA: ENST00000526000.5

CD44-221, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 722 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-221ENST00000526000 OR4M2Q8NGB6 313 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 OR1J1Q8NGS3 322 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 VANGL1Q8TAA9 524 aaPredicted RBP5.59□□□□□ -1.51
CD44-221ENST00000526000 DNAJA4Q8WW22 397 aaPredicted RBP5.59□□□□□ -1.51
CD44-221ENST00000526000 LZICQ8WZA0 190 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 RAB1CQ92928 201 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 TMEM54Q969K7 222 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 MCUR1Q96AQ8 359 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 SLC7A6OSQ96CW6 309 aaPredicted RBP5.59□□□□□ -1.51
CD44-221ENST00000526000 SLC41A3Q96GZ6 507 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 LRR1Q96L50 414 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 ZNF347Q96SE7 839 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 CDRT15Q96T59 188 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 EPYCQ99645 322 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 MCHR1Q99705 422 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 ZNF747Q9BV97 191 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 TRIM15Q9C019 465 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 LRMDAQ9H2I8 198 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 IKZF5Q9H5V7 419 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 GORASP2Q9H8Y8 452 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 UNKLQ9H9P5 680 aaKnown RBP5.59□□□□□ -1.51
CD44-221ENST00000526000 TMEM38BQ9NVV0 291 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 TAS2R5Q9NYW4 299 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 ADA2Q9NZK5 511 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 ZNF69Q9UC07 566 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 CD300AQ9UGN4 299 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 EGFL7Q9UHF1 273 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 SLC7A8Q9UHI5 535 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 MAGEL2Q9UJ55 1249 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 SLC13A4Q9UKG4 626 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 BAG5Q9UL15 447 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 MGAM2Q2M2H8 2515 aa5.59□□□□□ -1.51
CD44-221ENST00000526000 IQCMA0A1B0GVH7 501 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 CLDN25C9JDP6 229 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 BLOC1S5-TXNDC5H3BN57 136 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 M0QX08 132 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 CXCR6O00574 342 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 GSTA4O15217 222 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 ZNF205O95201 554 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 HIST1H2ABP04908 130 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 F13BP05160 661 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 KDELR2P33947 212 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 APLNRP35414 380 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 LIMS1P48059 325 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 ZNF81P51508 661 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 CLRN1P58418 232 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 TEKQ02763 1124 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 HSF2Q03933 536 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 FOXL1Q12952 345 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 BAMBIQ13145 260 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 TRIM25Q14258 630 aaKnown RBP5.58□□□□□ -1.52
CD44-221ENST00000526000 TBC1D28Q2M2D7 210 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 MIDNQ504T8 468 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 PDLIM3Q53GG5 364 aaPredicted RBP5.58□□□□□ -1.52
CD44-221ENST00000526000 TMEM255AQ5JRV8 349 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 PGM2L1Q6PCE3 622 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 SHISA2Q6UWI4 295 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 USP43Q70EL4 1123 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 HIST3H2AQ7L7L0 130 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 PIWIL3Q7Z3Z3 882 aaKnown RBP5.58□□□□□ -1.52
CD44-221ENST00000526000 PXKQ7Z7A4 578 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 ARMC8Q8IUR7 673 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 LSMEM1Q8N8F7 131 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 SCAIQ8N9R8 606 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 CPEB3Q8NE35 698 aaKnown RBP5.58□□□□□ -1.52
CD44-221ENST00000526000 OR5J2Q8NH18 312 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 AKR7LQ8NHP1 331 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 ZNF519Q8TB69 540 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 SLC25A40Q8TBP6 338 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 ST7LQ8TDW4 575 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 SLC26A7Q8TE54 656 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 GEMIN6Q8WXD5 167 aaKnown RBP5.58□□□□□ -1.52
CD44-221ENST00000526000 NSMAFQ92636 917 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 HIST1H2ACQ93077 130 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 MCHR2Q969V1 340 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 ZNF566Q969W8 418 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 RAB39BQ96DA2 213 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 ASB9Q96DX5 294 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 TIMD4Q96H15 378 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 ZNF48Q96MX3 618 aaPredicted RBP5.58□□□□□ -1.52
CD44-221ENST00000526000 POLR2J2Q9GZM3 115 aaKnown RBP5.58□□□□□ -1.52
CD44-221ENST00000526000 POLR2J3Q9H1A7 115 aaKnown RBP5.58□□□□□ -1.52
CD44-221ENST00000526000 MSL2Q9HCI7 577 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 SLCO1C1Q9NYB5 712 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 MRPL39Q9NYK5 338 aaKnown RBP5.58□□□□□ -1.52
CD44-221ENST00000526000 ACTR3BQ9P1U1 418 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 GPR160Q9UJ42 338 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 RPS6KA6Q9UK32 745 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 SAMD4AQ9UPU9 718 aaKnown RBP5.58□□□□□ -1.52
CD44-221ENST00000526000 SNX13Q9Y5W8 968 aa5.58□□□□□ -1.52
CD44-221ENST00000526000 A0A0B4J2E0 115 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 IGHV3-64DA0A0J9YX35 117 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 A0A1B0GX12 115 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 C5orf49A4QMS7 147 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 ZSCAN5BA6NJL1 495 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 AQP12BA6NM10 295 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 TRAPPC2LH3BP13 241 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 GSC2O15499 205 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 FMO6PO60774 539 aa5.57□□□□□ -1.52
CD44-221ENST00000526000 MFN2O95140 757 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms