RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 SLIT2O94813 1529 aa3.84□□□□□ -1.8
CD44-213ENST00000525209 LMTK2Q8IWU2 1503 aa3.84□□□□□ -1.8
CD44-213ENST00000525209 NRXN3Q9Y4C0 1643 aa3.84□□□□□ -1.8
CD44-213ENST00000525209 AKAP12Q02952 1782 aa3.84□□□□□ -1.8
CD44-213ENST00000525209 TRAV8-7A0A075B6U6 113 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 A0A087WZ39 114 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 KIR2DL5BA0A0G2JN68 375 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 KIR2DL5BA0A0G2JPC4 375 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 A0A1B0GU03 582 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 A0A1W2PR80 420 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 hDV102S1A0JD36 115 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 GAGE12JA6NER3 117 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 SEC14L6B5MCN3 397 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 F5H768 121 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 H3BMQ9 156 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP3.83□□□□□ -1.8
CD44-213ENST00000525209 SLC9A3R1O14745 358 aaPredicted RBP3.83□□□□□ -1.8
CD44-213ENST00000525209 FADS1O60427 444 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 STX10O60499 249 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 SHOX2O60902 331 aaPredicted RBP3.83□□□□□ -1.8
CD44-213ENST00000525209 CLDN11O75508 207 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 TRAPPC6AO75865 159 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 GLSO94925 669 aaPredicted RBP3.83□□□□□ -1.8
CD44-213ENST00000525209 ANGPTL1O95841 491 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 OXTP01178 125 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 HBE1P02100 147 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 CALB1P05937 261 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 FGF3P11487 239 aaPredicted RBP3.83□□□□□ -1.8
CD44-213ENST00000525209 MYOD1P15172 320 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 LOXP28300 417 aaPredicted RBP3.83□□□□□ -1.8
CD44-213ENST00000525209 TIMP3P35625 211 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 TMEM33P57088 247 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 FBXW4P57775 412 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 TAS2R60P59551 318 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 HILS1P60008 231 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 RANP62826 216 aaKnown RBP3.83□□□□□ -1.8
CD44-213ENST00000525209 ZNF33BQ06732 778 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 ILF3Q12906 894 aaKnown RBP eCLIP3.83□□□□□ -1.8
CD44-213ENST00000525209 ELAVL2Q12926 359 aaKnown RBP3.83□□□□□ -1.8
CD44-213ENST00000525209 SRSF9Q13242 221 aaKnown RBP eCLIP3.83□□□□□ -1.8
CD44-213ENST00000525209 AQP6Q13520 282 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 RAB31Q13636 194 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 ABRAXAS2Q15018 415 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 PON3Q15166 354 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 RAB35Q15286 201 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 TAF1AQ15573 450 aaPredicted RBP3.83□□□□□ -1.8
CD44-213ENST00000525209 DCST2Q5T1A1 773 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 IRAK1BP1Q5VVH5 260 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 HACD4Q5VWC8 232 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 FRMPD2BQ6IN97 320 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 STAC2Q6ZMT1 411 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 SLC16A12Q6ZSM3 486 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 Q6ZVQ6 151 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 ASB18Q6ZVZ8 466 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 PTF1AQ7RTS3 328 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 MRPL52Q86TS9 123 aaKnown RBP3.83□□□□□ -1.8
CD44-213ENST00000525209 RALGPS2Q86X27 583 aaPredicted RBP3.83□□□□□ -1.8
CD44-213ENST00000525209 RNF113BQ8IZP6 322 aaKnown RBP3.83□□□□□ -1.8
CD44-213ENST00000525209 PUSL1Q8N0Z8 303 aaKnown RBP3.83□□□□□ -1.8
CD44-213ENST00000525209 KIR2DL5AQ8N109 375 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 NANOGP1Q8N7R0 232 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 ATP6V0D2Q8N8Y2 350 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 PXT1Q8NFP0 134 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 OR9Q2Q8NGE9 314 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 OR5L1Q8NGL2 311 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 OR51A7Q8NH64 312 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 KIR2DL5BQ8NHK3 375 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 SYNPRQ8TBG9 265 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 UFD1Q92890 307 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 CREB3L1Q96BA8 519 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 RMND5BQ96G75 393 aaPredicted RBP3.83□□□□□ -1.8
CD44-213ENST00000525209 SIGLEC10Q96LC7 697 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 HBEGFQ99075 208 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 ULBP1Q9BZM6 244 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 TRIM4Q9C037 500 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 FAM107BQ9H098 131 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 MFSD1Q9H3U5 465 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 TRABDQ9H4I3 376 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 DHX35Q9H5Z1 703 aaKnown RBP3.83□□□□□ -1.8
CD44-213ENST00000525209 REEP4Q9H6H4 257 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 EML4Q9HC35 981 aaKnown RBP3.83□□□□□ -1.8
CD44-213ENST00000525209 C6orf50Q9HD87 102 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 ABCB9Q9NP78 766 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 UBE2TQ9NPD8 197 aaPredicted RBP3.83□□□□□ -1.8
CD44-213ENST00000525209 IFT46Q9NQC8 304 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 SLC2A9Q9NRM0 540 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 TEX10Q9NXF1 929 aaPredicted RBP3.83□□□□□ -1.8
CD44-213ENST00000525209 TMEM9Q9P0T7 183 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 SLC17A6Q9P2U8 582 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 PRODH2Q9UF12 536 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 SMPXQ9UHP9 88 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 ING1Q9UK53 422 aaPredicted RBP3.83□□□□□ -1.8
CD44-213ENST00000525209 SLC7A7Q9UM01 511 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 AMDHD2Q9Y303 409 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 SNX24Q9Y343 169 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 PLEKHH1Q9ULM0 1364 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 PXDNQ92626 1479 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 CLTCL1P53675 1640 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 IQGAP3Q86VI3 1631 aa3.83□□□□□ -1.8
CD44-213ENST00000525209 FMN2Q9NZ56 1722 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms