RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 HILS1P60008 231 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 PSG4Q00888 419 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 ZNF718Q3SXZ3 478 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 LRRC23Q53EV4 343 aaPredicted RBP13.09□□□□□ -0.31
MRPS28-209ENST00000522987 C10orf128Q5T292 105 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 ARMC4Q5T2S8 1044 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 OTPQ5XKR4 325 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 DPPA2Q7Z7J5 298 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 OR4M2Q8NGB6 313 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 RAB1CQ92928 201 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 ELMOD3Q96FG2 381 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 MARS2Q96GW9 593 aaKnown RBP13.09□□□□□ -0.31
MRPS28-209ENST00000522987 TIMD4Q96H15 378 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 DUX5Q96PT3 197 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 C1QTNF5Q9BXJ0 243 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 WNT5BQ9H1J7 359 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 SIAEQ9HAT2 523 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 ESM1Q9NQ30 184 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 NKIRAS2Q9NYR9 191 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 EIF3KQ9UBQ5 218 aaKnown RBP13.09□□□□□ -0.31
MRPS28-209ENST00000522987 PPIAL4AQ9Y536 164 aa13.09□□□□□ -0.31
MRPS28-209ENST00000522987 PLSCR5A0PG75 271 aa13.08□□□□□ -0.32
MRPS28-209ENST00000522987 H7C1C5 153 aa13.08□□□□□ -0.32
MRPS28-209ENST00000522987 WIPF1O43516 503 aa13.08□□□□□ -0.32
MRPS28-209ENST00000522987 MMP15P51511 669 aa13.08□□□□□ -0.32
MRPS28-209ENST00000522987 PPP1CBP62140 327 aa13.08□□□□□ -0.32
MRPS28-209ENST00000522987 LCN6P62502 163 aa13.08□□□□□ -0.32
MRPS28-209ENST00000522987 MRPS34P82930 218 aaKnown RBP13.08□□□□□ -0.32
MRPS28-209ENST00000522987 SCGB2A2Q13296 93 aa13.08□□□□□ -0.32
MRPS28-209ENST00000522987 ZNF774Q6NX45 483 aa13.08□□□□□ -0.32
MRPS28-209ENST00000522987 SLC25A47Q6Q0C1 308 aa13.08□□□□□ -0.32
MRPS28-209ENST00000522987 CCDC80Q76M96 950 aa13.08□□□□□ -0.32
MRPS28-209ENST00000522987 C1QL2Q7Z5L3 287 aa13.08□□□□□ -0.32
MRPS28-209ENST00000522987 BPIFB2Q8N4F0 458 aa13.08□□□□□ -0.32
MRPS28-209ENST00000522987 KLF14Q8TD94 323 aaPredicted RBP13.08□□□□□ -0.32
MRPS28-209ENST00000522987 NMD3Q96D46 503 aaKnown RBP13.08□□□□□ -0.32
MRPS28-209ENST00000522987 TPD52L3Q96J77 140 aa13.08□□□□□ -0.32
MRPS28-209ENST00000522987 SEPHS2Q99611 448 aa13.08□□□□□ -0.32
MRPS28-209ENST00000522987 ECSITQ9BQ95 431 aa13.08□□□□□ -0.32
MRPS28-209ENST00000522987 POFUT1Q9H488 388 aa13.08□□□□□ -0.32
MRPS28-209ENST00000522987 C7orf69Q9H7B7 122 aa13.08□□□□□ -0.32
MRPS28-209ENST00000522987 GMPR2Q9P2T1 348 aaKnown RBP13.08□□□□□ -0.32
MRPS28-209ENST00000522987 RHCGQ9UBD6 479 aa13.08□□□□□ -0.32
MRPS28-209ENST00000522987 MED31Q9Y3C7 131 aa13.08□□□□□ -0.32
MRPS28-209ENST00000522987 TMEM89A2RUT3 159 aa13.07□□□□□ -0.32
MRPS28-209ENST00000522987 OR5F1O95221 314 aa13.07□□□□□ -0.32
MRPS28-209ENST00000522987 IFI30P13284 250 aa13.07□□□□□ -0.32
MRPS28-209ENST00000522987 EGR1P18146 543 aa13.07□□□□□ -0.32
MRPS28-209ENST00000522987 CTXN1P60606 82 aa13.07□□□□□ -0.32
MRPS28-209ENST00000522987 CYLC2Q14093 348 aaPredicted RBP13.07□□□□□ -0.32
MRPS28-209ENST00000522987 TAF11Q15544 211 aa13.07□□□□□ -0.32
MRPS28-209ENST00000522987 MOGQ16653 247 aa13.07□□□□□ -0.32
MRPS28-209ENST00000522987 ALG10Q5BKT4 473 aa13.07□□□□□ -0.32
MRPS28-209ENST00000522987 OR51A7Q8NH64 312 aa13.07□□□□□ -0.32
MRPS28-209ENST00000522987 FAM216AQ8WUB2 273 aa13.07□□□□□ -0.32
MRPS28-209ENST00000522987 ZFAND2BQ8WV99 257 aa13.07□□□□□ -0.32
MRPS28-209ENST00000522987 RASSF5Q8WWW0 418 aa13.07□□□□□ -0.32
MRPS28-209ENST00000522987 MAGEB18Q96M61 343 aa13.07□□□□□ -0.32
MRPS28-209ENST00000522987 OR2H1Q9GZK4 316 aa13.07□□□□□ -0.32
MRPS28-209ENST00000522987 TXNIPQ9H3M7 391 aa13.07□□□□□ -0.32
MRPS28-209ENST00000522987 EMC7Q9NPA0 242 aa13.07□□□□□ -0.32
MRPS28-209ENST00000522987 BAG5Q9UL15 447 aa13.07□□□□□ -0.32
MRPS28-209ENST00000522987 TRAV27A0A087WT01 109 aa13.06□□□□□ -0.32
MRPS28-209ENST00000522987 FXYD1O00168 92 aa13.06□□□□□ -0.32
MRPS28-209ENST00000522987 TIMM8AO60220 97 aaPredicted RBP13.06□□□□□ -0.32
MRPS28-209ENST00000522987 EDF1O60869 148 aaKnown RBP13.06□□□□□ -0.32
MRPS28-209ENST00000522987 UBOX5O94941 541 aa13.06□□□□□ -0.32
MRPS28-209ENST00000522987 SCG5P05408 212 aa13.06□□□□□ -0.32
MRPS28-209ENST00000522987 SBK2P0C263 348 aa13.06□□□□□ -0.32
MRPS28-209ENST00000522987 ZFP36P26651 326 aaKnown RBP13.06□□□□□ -0.32
MRPS28-209ENST00000522987 RBM34P42696 430 aaKnown RBP13.06□□□□□ -0.32
MRPS28-209ENST00000522987 ZNF133P52736 654 aaPredicted RBP13.06□□□□□ -0.32
MRPS28-209ENST00000522987 MMEL1Q495T6 779 aa13.06□□□□□ -0.32
MRPS28-209ENST00000522987 NRN1LQ496H8 165 aa13.06□□□□□ -0.32
MRPS28-209ENST00000522987 CYBRD1Q53TN4 286 aa13.06□□□□□ -0.32
MRPS28-209ENST00000522987 HDDC2Q7Z4H3 204 aa13.06□□□□□ -0.32
MRPS28-209ENST00000522987 CALHM3Q86XJ0 350 aa13.06□□□□□ -0.32
MRPS28-209ENST00000522987 ZDHHC22Q8N966 263 aa13.06□□□□□ -0.32
MRPS28-209ENST00000522987 NANPQ8TBE9 248 aa13.06□□□□□ -0.32
MRPS28-209ENST00000522987 LRRC58Q96CX6 371 aa13.06□□□□□ -0.32
MRPS28-209ENST00000522987 RBM4Q9BWF3 364 aaKnown RBP13.06□□□□□ -0.32
MRPS28-209ENST00000522987 SUCNR1Q9BXA5 334 aa13.06□□□□□ -0.32
MRPS28-209ENST00000522987 TMEM120AQ9BXJ8 343 aa13.06□□□□□ -0.32
MRPS28-209ENST00000522987 OPN4Q9UHM6 478 aa13.06□□□□□ -0.32
MRPS28-209ENST00000522987 J3KTA2 159 aa13.05□□□□□ -0.32
MRPS28-209ENST00000522987 MRASO14807 208 aa13.05□□□□□ -0.32
MRPS28-209ENST00000522987 PRSS23O95084 383 aa13.05□□□□□ -0.32
MRPS28-209ENST00000522987 RPL27P61353 136 aaKnown RBP13.05□□□□□ -0.32
MRPS28-209ENST00000522987 SEC61A1P61619 476 aaKnown RBP13.05□□□□□ -0.32
MRPS28-209ENST00000522987 TNFAIP6P98066 277 aaPredicted RBP13.05□□□□□ -0.32
MRPS28-209ENST00000522987 ENDOGQ14249 297 aaKnown RBP13.05□□□□□ -0.32
MRPS28-209ENST00000522987 FAM209AQ5JX71 171 aa13.05□□□□□ -0.32
MRPS28-209ENST00000522987 FAM27BQ5VT28 67 aa13.05□□□□□ -0.32
MRPS28-209ENST00000522987 OR13C2Q8NGS9 318 aa13.05□□□□□ -0.32
MRPS28-209ENST00000522987 ST7LQ8TDW4 575 aa13.05□□□□□ -0.32
MRPS28-209ENST00000522987 C10orf82Q8WW14 230 aa13.05□□□□□ -0.32
MRPS28-209ENST00000522987 BPIFA2Q96DR5 249 aa13.05□□□□□ -0.32
MRPS28-209ENST00000522987 RBP7Q96R05 134 aa13.05□□□□□ -0.32
MRPS28-209ENST00000522987 EGLN1Q9GZT9 426 aa13.05□□□□□ -0.32
MRPS28-209ENST00000522987 MMP26Q9NRE1 261 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms