RNA–Protein interactions for RNA: ENST00000522243.5

SDCBP-209, Transcript of syndecan binding protein, humanhuman

TSL 5

Gene SDCBP, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-209ENST00000522243 ACHEP22303 614 aa17.7■□□□□ 0.42
SDCBP-209ENST00000522243 LAP3P28838 519 aa17.7■□□□□ 0.42
SDCBP-209ENST00000522243 CDH15P55291 814 aa17.7■□□□□ 0.42
SDCBP-209ENST00000522243 LCN6P62502 163 aa17.7■□□□□ 0.42
SDCBP-209ENST00000522243 CCL8P80075 99 aa17.7■□□□□ 0.42
SDCBP-209ENST00000522243 PSG4Q00888 419 aa17.7■□□□□ 0.42
SDCBP-209ENST00000522243 THEM4Q5T1C6 240 aa17.7■□□□□ 0.42
SDCBP-209ENST00000522243 SNX33Q8WV41 574 aa17.7■□□□□ 0.42
SDCBP-209ENST00000522243 ACOT11Q8WXI4 607 aaPredicted RBP17.7■□□□□ 0.42
SDCBP-209ENST00000522243 KCTD14Q9BQ13 255 aaPredicted RBP17.7■□□□□ 0.42
SDCBP-209ENST00000522243 ELAC2Q9BQ52 826 aaKnown RBP17.7■□□□□ 0.42
SDCBP-209ENST00000522243 HINT3Q9NQE9 182 aaKnown RBP17.7■□□□□ 0.42
SDCBP-209ENST00000522243 CUBNO60494 3623 aa17.7■□□□□ 0.42
SDCBP-209ENST00000522243 CDC42EP2O14613 210 aa17.69■□□□□ 0.42
SDCBP-209ENST00000522243 WNT5AP41221 380 aa17.69■□□□□ 0.42
SDCBP-209ENST00000522243 SPATA46Q5T0L3 261 aa17.69■□□□□ 0.42
SDCBP-209ENST00000522243 FAM27BQ5VT28 67 aa17.69■□□□□ 0.42
SDCBP-209ENST00000522243 TMEM154Q6P9G4 183 aa17.69■□□□□ 0.42
SDCBP-209ENST00000522243 HACD2Q6Y1H2 254 aa17.69■□□□□ 0.42
SDCBP-209ENST00000522243 MBOAT2Q6ZWT7 520 aa17.69■□□□□ 0.42
SDCBP-209ENST00000522243 TSEN54Q7Z6J9 526 aaKnown RBP17.69■□□□□ 0.42
SDCBP-209ENST00000522243 ZNF101Q8IZC7 436 aa17.69■□□□□ 0.42
SDCBP-209ENST00000522243 RNF113BQ8IZP6 322 aaKnown RBP17.69■□□□□ 0.42
SDCBP-209ENST00000522243 CLDND2Q8NHS1 167 aa17.69■□□□□ 0.42
SDCBP-209ENST00000522243 POM121L2Q96KW2 1035 aa17.69■□□□□ 0.42
SDCBP-209ENST00000522243 SLCO1C1Q9NYB5 712 aa17.69■□□□□ 0.42
SDCBP-209ENST00000522243 EGFL7Q9UHF1 273 aa17.69■□□□□ 0.42
SDCBP-209ENST00000522243 GPR160Q9UJ42 338 aa17.69■□□□□ 0.42
SDCBP-209ENST00000522243 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP17.69■□□□□ 0.42
SDCBP-209ENST00000522243 LOC100509620A0A075B734 347 aa17.68■□□□□ 0.42
SDCBP-209ENST00000522243 C5orf49A4QMS7 147 aa17.68■□□□□ 0.42
SDCBP-209ENST00000522243 GMNCA6NCL1 334 aa17.68■□□□□ 0.42
SDCBP-209ENST00000522243 PPIHO43447 177 aaKnown RBP17.68■□□□□ 0.42
SDCBP-209ENST00000522243 DRD4P21917 467 aa17.68■□□□□ 0.42
SDCBP-209ENST00000522243 RPL4P36578 427 aaKnown RBP17.68■□□□□ 0.42
SDCBP-209ENST00000522243 SLC9A3P48764 834 aa17.68■□□□□ 0.42
SDCBP-209ENST00000522243 GDI2P50395 445 aaKnown RBP17.68■□□□□ 0.42
SDCBP-209ENST00000522243 PSME3P61289 254 aa17.68■□□□□ 0.42
SDCBP-209ENST00000522243 FAM205BPQ63HN1 556 aa17.68■□□□□ 0.42
SDCBP-209ENST00000522243 RRM2BQ7LG56 351 aa17.68■□□□□ 0.42
SDCBP-209ENST00000522243 REPIN1Q9BWE0 567 aaKnown RBP17.68■□□□□ 0.42
SDCBP-209ENST00000522243 OR2H1Q9GZK4 316 aa17.68■□□□□ 0.42
SDCBP-209ENST00000522243 WNT5BQ9H1J7 359 aa17.68■□□□□ 0.42
SDCBP-209ENST00000522243 NMNAT1Q9HAN9 279 aaPredicted RBP17.68■□□□□ 0.42
SDCBP-209ENST00000522243 EIF3KQ9UBQ5 218 aaKnown RBP17.68■□□□□ 0.42
SDCBP-209ENST00000522243 TMEFF2Q9UIK5 374 aaPredicted RBP17.68■□□□□ 0.42
SDCBP-209ENST00000522243 ADAM18Q9Y3Q7 739 aa17.68■□□□□ 0.42
SDCBP-209ENST00000522243 A6NIZ1 184 aa17.67■□□□□ 0.42
SDCBP-209ENST00000522243 RP2O75695 350 aa17.67■□□□□ 0.42
SDCBP-209ENST00000522243 SCG5P05408 212 aa17.67■□□□□ 0.42
SDCBP-209ENST00000522243 CST2P09228 141 aa17.67■□□□□ 0.42
SDCBP-209ENST00000522243 GUCA1AP43080 201 aaPredicted RBP17.67■□□□□ 0.42
SDCBP-209ENST00000522243 RAP1BP61224 184 aa17.67■□□□□ 0.42
SDCBP-209ENST00000522243 RAP1AP62834 184 aa17.67■□□□□ 0.42
SDCBP-209ENST00000522243 TSTQ16762 297 aaKnown RBP17.67■□□□□ 0.42
SDCBP-209ENST00000522243 KRTAP24-1Q3LI83 254 aa17.67■□□□□ 0.42
SDCBP-209ENST00000522243 ANKDD1AQ495B1 522 aa17.67■□□□□ 0.42
SDCBP-209ENST00000522243 CYP4Z1Q86W10 505 aa17.67■□□□□ 0.42
SDCBP-209ENST00000522243 SLC25A40Q8TBP6 338 aa17.67■□□□□ 0.42
SDCBP-209ENST00000522243 FNDC8Q8TC99 324 aa17.67■□□□□ 0.42
SDCBP-209ENST00000522243 C1orf159Q96HA4 380 aa17.67■□□□□ 0.42
SDCBP-209ENST00000522243 FAM46AQ96IP4 442 aaKnown RBP17.67■□□□□ 0.42
SDCBP-209ENST00000522243 Q96M85 177 aa17.67■□□□□ 0.42
SDCBP-209ENST00000522243 FAM107BQ9H098 131 aa17.67■□□□□ 0.42
SDCBP-209ENST00000522243 MYLK2Q9H1R3 596 aa17.67■□□□□ 0.42
SDCBP-209ENST00000522243 LPAR2Q9HBW0 351 aa17.67■□□□□ 0.42
SDCBP-209ENST00000522243 TREM2Q9NZC2 230 aa17.67■□□□□ 0.42
SDCBP-209ENST00000522243 ABCD2Q9UBJ2 740 aa17.67■□□□□ 0.42
SDCBP-209ENST00000522243 GRHPRQ9UBQ7 328 aa17.67■□□□□ 0.42
SDCBP-209ENST00000522243 ENPP4Q9Y6X5 453 aa17.67■□□□□ 0.42
SDCBP-209ENST00000522243 DNHD1Q96M86 4753 aa17.67■□□□□ 0.42
SDCBP-209ENST00000522243 FAM157AC9JC47 383 aa17.66■□□□□ 0.42
SDCBP-209ENST00000522243 NDUFAB1O14561 156 aa17.66■□□□□ 0.42
SDCBP-209ENST00000522243 TPD52L2O43399 206 aaKnown RBP17.66■□□□□ 0.42
SDCBP-209ENST00000522243 ZNF26P17031 533 aaPredicted RBP17.66■□□□□ 0.42
SDCBP-209ENST00000522243 GCH1P30793 250 aa17.66■□□□□ 0.42
SDCBP-209ENST00000522243 MPV17P39210 176 aa17.66■□□□□ 0.42
SDCBP-209ENST00000522243 TMEM33P57088 247 aa17.66■□□□□ 0.42
SDCBP-209ENST00000522243 ENDOGQ14249 297 aaKnown RBP17.66■□□□□ 0.42
SDCBP-209ENST00000522243 ZNF718Q3SXZ3 478 aa17.66■□□□□ 0.42
SDCBP-209ENST00000522243 ZBED5Q49AG3 693 aa17.66■□□□□ 0.42
SDCBP-209ENST00000522243 TMEM255AQ5JRV8 349 aa17.66■□□□□ 0.42
SDCBP-209ENST00000522243 AVPI1Q5T686 147 aa17.66■□□□□ 0.42
SDCBP-209ENST00000522243 GLYATQ6IB77 296 aa17.66■□□□□ 0.42
SDCBP-209ENST00000522243 ZNF774Q6NX45 483 aa17.66■□□□□ 0.42
SDCBP-209ENST00000522243 UGT2A3Q6UWM9 527 aa17.66■□□□□ 0.42
SDCBP-209ENST00000522243 FOXL2NBQ6ZUU3 175 aa17.66■□□□□ 0.42
SDCBP-209ENST00000522243 TMPRSS11FQ6ZWK6 438 aa17.66■□□□□ 0.42
SDCBP-209ENST00000522243 RNF148Q8N7C7 305 aa17.66■□□□□ 0.42
SDCBP-209ENST00000522243 ZNF416Q9BWM5 594 aa17.66■□□□□ 0.42
SDCBP-209ENST00000522243 RACGAP1Q9H0H5 632 aa17.66■□□□□ 0.42
SDCBP-209ENST00000522243 EMC7Q9NPA0 242 aa17.66■□□□□ 0.42
SDCBP-209ENST00000522243 RPS6KA6Q9UK32 745 aa17.66■□□□□ 0.42
SDCBP-209ENST00000522243 TIMM10BQ9Y5J6 103 aa17.66■□□□□ 0.42
SDCBP-209ENST00000522243 IGHV3-13P01766 116 aa17.65■□□□□ 0.42
SDCBP-209ENST00000522243 H1F0P07305 194 aaKnown RBP17.65■□□□□ 0.42
SDCBP-209ENST00000522243 CD14P08571 375 aa17.65■□□□□ 0.42
SDCBP-209ENST00000522243 MSR1P21757 451 aa17.65■□□□□ 0.42
SDCBP-209ENST00000522243 DVL1P1P54792 670 aaPredicted RBP17.65■□□□□ 0.42
SDCBP-209ENST00000522243 MRPS11P82912 194 aaKnown RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms