RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-208ENST00000520228 CHDHQ8NE62 594 aaPredicted RBP6.05□□□□□ -1.44
SDCBP-208ENST00000520228 RAB8BQ92930 207 aa6.05□□□□□ -1.44
SDCBP-208ENST00000520228 SFXN2Q96NB2 322 aa6.05□□□□□ -1.44
SDCBP-208ENST00000520228 SDF2Q99470 211 aa6.05□□□□□ -1.44
SDCBP-208ENST00000520228 TTYH2Q9BSA4 534 aa6.05□□□□□ -1.44
SDCBP-208ENST00000520228 UGT2B28Q9BY64 529 aa6.05□□□□□ -1.44
SDCBP-208ENST00000520228 OR2B2Q9GZK3 357 aa6.05□□□□□ -1.44
SDCBP-208ENST00000520228 OR51I1Q9H343 314 aa6.05□□□□□ -1.44
SDCBP-208ENST00000520228 RABEP2Q9H5N1 569 aa6.05□□□□□ -1.44
SDCBP-208ENST00000520228 COQ3Q9NZJ6 369 aa6.05□□□□□ -1.44
SDCBP-208ENST00000520228 NPAP1Q9NZP6 1156 aa6.05□□□□□ -1.44
SDCBP-208ENST00000520228 RPH3AQ9Y2J0 694 aaPredicted RBP6.05□□□□□ -1.44
SDCBP-208ENST00000520228 ESPL1Q14674 2120 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 A0A087WZY1 265 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 NPIPA5A0A0B4J1W7 369 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 A0A1W2PPI3 338 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 A0A1W2PQD3 144 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 B4DXG7 233 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 NPIPA7E9PJI5 369 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 NPIPB9F8W1W9 429 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 HMGN4O00479 90 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 NR5A2O00482 541 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 SSX4O60224 188 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 GPR137BO60478 399 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 FCMRO60667 390 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 C1QCP02747 245 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 ZCCHC18P0CG32 403 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 NPIPA8P0DM63 369 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 VPREB1P12018 145 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 CPN1P15169 458 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 MAGEA8P43361 318 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 ZFP36L2P47974 494 aaKnown RBP6.04□□□□□ -1.44
SDCBP-208ENST00000520228 STARP49675 285 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 NUP107P57740 925 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 B3GALT5-AS1P59052 145 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 HPCAP84074 193 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 SRYQ05066 204 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 PNRC1Q12796 327 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-208ENST00000520228 ART3Q13508 389 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 RCAN2Q14206 197 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 SQLEQ14534 574 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 GANABQ14697 944 aaKnown RBP6.04□□□□□ -1.44
SDCBP-208ENST00000520228 CD226Q15762 336 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 ZNF630Q2M218 657 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-208ENST00000520228 GLYR1Q49A26 553 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-208ENST00000520228 ACSF3Q4G176 576 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-208ENST00000520228 GPAT3Q53EU6 434 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 AGKQ53H12 422 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 RAET1LQ5VY80 246 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 METTL21CQ5VZV1 264 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 RTL6Q6ICC9 239 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 ENPP6Q6UWR7 440 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 MTERF4Q7Z6M4 381 aaKnown RBP6.04□□□□□ -1.44
SDCBP-208ENST00000520228 CCDC71Q8IV32 467 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-208ENST00000520228 FUNDC1Q8IVP5 155 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 RPRMLQ8N4K4 120 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 MARVELD2Q8N4S9 558 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 ZNF614Q8N883 585 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 SLC24A4Q8NFF2 622 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 OR10S1Q8NGN2 331 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 OR10Q1Q8NGQ4 319 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 PNPT1Q8TCS8 783 aaKnown RBP6.04□□□□□ -1.44
SDCBP-208ENST00000520228 CA5BP1Q8WTZ4 195 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 GTF2H4Q92759 462 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 ROPN1LQ96C74 230 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 SPDL1Q96EA4 605 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 SH3YL1Q96HL8 342 aaPredicted RBP6.04□□□□□ -1.44
SDCBP-208ENST00000520228 TRNT1Q96Q11 434 aaKnown RBP6.04□□□□□ -1.44
SDCBP-208ENST00000520228 PIGQQ9BRB3 760 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 KLHL4Q9C0H6 718 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 NMUR2Q9GZQ4 415 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 ZNF350Q9GZX5 532 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 MMP28Q9H239 520 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 POLE3Q9NRF9 147 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 FGFR1OP2Q9NVK5 253 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 CCDC167Q9P0B6 97 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 RHCGQ9UBD6 479 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 LIPT1Q9Y234 373 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 FAM215AQ9Y5M1 114 aa6.04□□□□□ -1.44
SDCBP-208ENST00000520228 MAST4O15021 2626 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 HIVEP3Q5T1R4 2406 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 A0A096LPI6 279 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 SERINC4A6NH21 518 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 KIAA0513O60268 411 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 H6PDO95479 791 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 EPPINO95925 133 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 BCL10O95999 233 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 IGLV2-11P01706 119 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 GUSBP08236 651 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 HTR1EP28566 365 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 CHRNB4P30926 498 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 MDH1P40925 334 aaKnown RBP6.03□□□□□ -1.44
SDCBP-208ENST00000520228 CRATP43155 626 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 LHX2P50458 406 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 ZNF41P51814 821 aaPredicted RBP6.03□□□□□ -1.44
SDCBP-208ENST00000520228 ZNF141Q15928 474 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 BCL2A1Q16548 175 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 GTDC1Q4AE62 458 aa6.03□□□□□ -1.44
SDCBP-208ENST00000520228 DDX59Q5T1V6 619 aaKnown RBP eCLIP6.03□□□□□ -1.44
SDCBP-208ENST00000520228 PDZK1Q5T2W1 519 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms