RNA–Protein interactions for RNA: ENST00000518931.1

SQLE-203, Transcript of squalene epoxidase, humanhuman

TSL 4

Gene SQLE, Length 554 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-203ENST00000518931 TMEM255BQ8WV15 326 aa5.04□□□□□ -1.6
SQLE-203ENST00000518931 CREB3L1Q96BA8 519 aa5.04□□□□□ -1.6
SQLE-203ENST00000518931 C10orf90Q96M02 699 aa5.04□□□□□ -1.6
SQLE-203ENST00000518931 Q96MT0 163 aa5.04□□□□□ -1.6
SQLE-203ENST00000518931 ERGIC2Q96RQ1 377 aa5.04□□□□□ -1.6
SQLE-203ENST00000518931 RPP25Q9BUL9 199 aaKnown RBP5.04□□□□□ -1.6
SQLE-203ENST00000518931 ARRDC1-AS1Q9H2J1 176 aa5.04□□□□□ -1.6
SQLE-203ENST00000518931 MFSD1Q9H3U5 465 aa5.04□□□□□ -1.6
SQLE-203ENST00000518931 C6orf50Q9HD87 102 aa5.04□□□□□ -1.6
SQLE-203ENST00000518931 ABCB9Q9NP78 766 aa5.04□□□□□ -1.6
SQLE-203ENST00000518931 FBXO8Q9NRD0 319 aa5.04□□□□□ -1.6
SQLE-203ENST00000518931 CUTCQ9NTM9 273 aa5.04□□□□□ -1.6
SQLE-203ENST00000518931 DUS2Q9NX74 493 aaKnown RBP5.04□□□□□ -1.6
SQLE-203ENST00000518931 SIGLEC8Q9NYZ4 499 aa5.04□□□□□ -1.6
SQLE-203ENST00000518931 TMEM9Q9P0T7 183 aa5.04□□□□□ -1.6
SQLE-203ENST00000518931 ENOPH1Q9UHY7 261 aa5.04□□□□□ -1.6
SQLE-203ENST00000518931 PSG11Q9UQ72 335 aa5.04□□□□□ -1.6
SQLE-203ENST00000518931 KIF21AQ7Z4S6 1674 aa5.04□□□□□ -1.6
SQLE-203ENST00000518931 SPATA31E1Q6ZUB1 1445 aa5.04□□□□□ -1.6
SQLE-203ENST00000518931 EPRSP07814 1512 aaKnown RBP5.03□□□□□ -1.6
SQLE-203ENST00000518931 FAM135AQ9P2D6 1515 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 PCDH11XQ9BZA7 1347 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 FAM172BPA6NC97 362 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 SIGLEC16A6NMB1 481 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 LMO7DNF2Z398 122 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 CCL24O00175 119 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 DFFAO00273 331 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 RGS16O15492 202 aaPredicted RBP5.03□□□□□ -1.6
SQLE-203ENST00000518931 HPGDSO60760 199 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 CD160O95971 181 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 CA1P00915 261 aaPredicted RBP5.03□□□□□ -1.6
SQLE-203ENST00000518931 PAEPP09466 180 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 ZDHHC11BP0C7U3 371 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 FAM228BP0C875 321 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 ICAM2P13598 275 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 AP1S2P56377 157 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 KRTAP10-9P60411 292 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 DHODHQ02127 395 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 TNFRSF9Q07011 255 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 MAD2L1BPQ15013 274 aaPredicted RBP5.03□□□□□ -1.6
SQLE-203ENST00000518931 SF3A2Q15428 464 aaKnown RBP5.03□□□□□ -1.6
SQLE-203ENST00000518931 HAGHQ16775 308 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 DUOXA1Q1HG43 343 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 GTDC1Q4AE62 458 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 SOHLH1Q5JUK2 328 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 SLC35D3Q5M8T2 416 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 STPG1Q5TH74 334 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 MEDAGQ5VYS4 303 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 TRIQKQ629K1 86 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 FAM45BPQ6NSW5 357 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 EMBQ6PCB8 327 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 Q6ZSR3 168 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 Q71RC1 249 aaPredicted RBP5.03□□□□□ -1.6
SQLE-203ENST00000518931 Q75L30 129 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 ZNF547Q8IVP9 402 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 PUSL1Q8N0Z8 303 aaKnown RBP5.03□□□□□ -1.6
SQLE-203ENST00000518931 PDIK1LQ8N165 341 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 CIARTQ8N365 385 aaPredicted RBP5.03□□□□□ -1.6
SQLE-203ENST00000518931 MTURNQ8N3F0 131 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 PXT1Q8NFP0 134 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 OR2L5Q8NG80 312 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 OR4K2Q8NGD2 314 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 OR1B1Q8NGR6 318 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 OR51A7Q8NH64 312 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 RNASEH2CQ8TDP1 164 aaKnown RBP5.03□□□□□ -1.6
SQLE-203ENST00000518931 MAFIPQ8WZ33 124 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.03□□□□□ -1.6
SQLE-203ENST00000518931 YIPF6Q96EC8 236 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 WDR34Q96EX3 536 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 PCED1BQ96HM7 432 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 TRIM51Q9BSJ1 452 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 DDA1Q9BW61 102 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 ALG9Q9H6U8 611 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 CAB39LQ9H9S4 337 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 SDF2L1Q9HCN8 221 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 CTPS2Q9NRF8 586 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 NLE1Q9NVX2 485 aaPredicted RBP5.03□□□□□ -1.6
SQLE-203ENST00000518931 CLN6Q9NWW5 311 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 DNAJC12Q9UKB3 198 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 RAB26Q9ULW5 256 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 UBQLN1Q9UMX0 589 aaKnown RBP5.03□□□□□ -1.6
SQLE-203ENST00000518931 AK6Q9Y3D8 172 aaKnown RBP5.03□□□□□ -1.6
SQLE-203ENST00000518931 CSNK1G3Q9Y6M4 447 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 C9orf84Q5VXU9 1444 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 SAMD9Q5K651 1589 aa5.03□□□□□ -1.6
SQLE-203ENST00000518931 NRXN1Q9ULB1 1477 aa5.02□□□□□ -1.61
SQLE-203ENST00000518931 FTCDNL1E5RQL4 147 aa5.02□□□□□ -1.61
SQLE-203ENST00000518931 ATP6V1G2-DDX39BF2Z307 99 aa5.02□□□□□ -1.61
SQLE-203ENST00000518931 KPNA3O00505 521 aaPredicted RBP5.02□□□□□ -1.61
SQLE-203ENST00000518931 MAGEC1O60732 1142 aa5.02□□□□□ -1.61
SQLE-203ENST00000518931 NOS1APO75052 506 aaPredicted RBP5.02□□□□□ -1.61
SQLE-203ENST00000518931 CEACAM4O75871 244 aa5.02□□□□□ -1.61
SQLE-203ENST00000518931 TOXO94900 526 aa5.02□□□□□ -1.61
SQLE-203ENST00000518931 CTDNEP1O95476 244 aa5.02□□□□□ -1.61
SQLE-203ENST00000518931 HLA-AP01891 365 aaKnown RBP5.02□□□□□ -1.61
SQLE-203ENST00000518931 ISG15P05161 165 aa5.02□□□□□ -1.61
SQLE-203ENST00000518931 GUSBP08236 651 aa5.02□□□□□ -1.61
SQLE-203ENST00000518931 GFAPP14136 432 aa5.02□□□□□ -1.61
SQLE-203ENST00000518931 CELP19835 753 aa5.02□□□□□ -1.61
SQLE-203ENST00000518931 MARK3P27448 753 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms