RNA–Protein interactions for RNA: ENST00000517691.1

SKP1-204, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 2,033 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-204ENST00000517691 IFT52Q9Y366 437 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 SH3GLB1Q9Y371 365 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 WIF1Q9Y5W5 379 aa2.46□□□□□ -2.02
SKP1-204ENST00000517691 CACNA1GO43497 2377 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 CCDC88CQ9P219 2028 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 A0A0A0MQY5 61 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 LRRC3CA6NJW4 275 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 C17orf51A8MQB3 221 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 NPIPA2E9PIF3 369 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 NPIPA3F8WFD2 350 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 HMGN4O00479 90 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 CCL21O00585 134 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 MRASO14807 208 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 AIM2O14862 343 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 FADS1O60427 444 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 SNX3O60493 162 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 SLC19A2O60779 497 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 GMNNO75496 209 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 GLSO94925 669 aaPredicted RBP2.45□□□□□ -2.02
SKP1-204ENST00000517691 H6PDO95479 791 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 OXSR1O95747 527 aaPredicted RBP2.45□□□□□ -2.02
SKP1-204ENST00000517691 ECDO95905 644 aaPredicted RBP2.45□□□□□ -2.02
SKP1-204ENST00000517691 MBPP02686 304 aaPredicted RBP2.45□□□□□ -2.02
SKP1-204ENST00000517691 HIST1H2ABP04908 130 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 BCHEP06276 602 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 ACAA1P09110 424 aaPredicted RBP2.45□□□□□ -2.02
SKP1-204ENST00000517691 STAG3L2P0CL84 134 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 VPREB1P12018 145 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 COX4I1P13073 169 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 TBXA2RP21731 343 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 PPIBP23284 216 aaKnown RBP2.45□□□□□ -2.02
SKP1-204ENST00000517691 ELAVL4P26378 380 aaKnown RBP2.45□□□□□ -2.02
SKP1-204ENST00000517691 DPP4P27487 766 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 FCGR2BP31994 310 aaPredicted RBP2.45□□□□□ -2.02
SKP1-204ENST00000517691 DCTP40126 519 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 PTGDSP41222 190 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 MAP3K8P41279 467 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 NPBWR1P48145 328 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 ATP12AP54707 1039 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 DSCR4P56555 118 aaPredicted RBP2.45□□□□□ -2.02
SKP1-204ENST00000517691 MTPNP58546 118 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 DSTNP60981 165 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 TXNL4AP83876 142 aaKnown RBP2.45□□□□□ -2.02
SKP1-204ENST00000517691 SORDQ00796 357 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 SRYQ05066 204 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 PIGFQ07326 219 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 ART3Q13508 389 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 CAPRIN1Q14444 709 aaKnown RBP2.45□□□□□ -2.02
SKP1-204ENST00000517691 RGNQ15493 299 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 CYP51A1Q16850 503 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 ARHGAP11BQ3KRB8 267 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 EIPR1Q53HC9 387 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 SPANXN2Q5MJ10 180 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 WLSQ5T9L3 541 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 PRAMEF5Q5TYX0 476 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 PRAMEF6Q5VXH4 476 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 REP15Q6BDI9 236 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 BTNL8Q6UX41 500 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 APOOLQ6UXV4 268 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 EIF3MQ7L2H7 374 aaKnown RBP2.45□□□□□ -2.02
SKP1-204ENST00000517691 HIST3H2AQ7L7L0 130 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 NRARPQ7Z6K4 114 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 FJX1Q86VR8 437 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 ZNF575Q86XF7 245 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 PLCZ1Q86YW0 608 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 LAX1Q8IWV1 398 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 CADM3Q8N126 398 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 COMMD1Q8N668 190 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 ANKFN1Q8N957 763 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 WDSUB1Q8N9V3 476 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 FAM83FQ8NEG4 500 aaPredicted RBP2.45□□□□□ -2.02
SKP1-204ENST00000517691 ATP6V1C2Q8NEY4 427 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 OR52L2PQ8NGH6 319 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 OR5M1Q8NGP8 315 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 RP9Q8TA86 221 aaKnown RBP2.45□□□□□ -2.02
SKP1-204ENST00000517691 BBS10Q8TAM1 723 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 TSEN15Q8WW01 171 aaKnown RBP2.45□□□□□ -2.02
SKP1-204ENST00000517691 RFKQ969G6 155 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 ABTB1Q969K4 478 aaPredicted RBP2.45□□□□□ -2.02
SKP1-204ENST00000517691 MAL2Q969L2 176 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 MCHR2Q969V1 340 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 RCN3Q96D15 328 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 CMTM5Q96DZ9 223 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 FAM71F1Q96KD3 344 aaPredicted RBP2.45□□□□□ -2.02
SKP1-204ENST00000517691 MS4A10Q96PG2 267 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 TRNT1Q96Q11 434 aaKnown RBP2.45□□□□□ -2.02
SKP1-204ENST00000517691 RAB40CQ96S21 281 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 GPA33Q99795 319 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 ECSITQ9BQ95 431 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 ATG101Q9BSB4 218 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 TMEM43Q9BTV4 400 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 CADM1Q9BY67 442 aaKnown RBP2.45□□□□□ -2.02
SKP1-204ENST00000517691 PRRG3Q9BZD7 231 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 MTHFD2LQ9H903 347 aaPredicted RBP2.45□□□□□ -2.02
SKP1-204ENST00000517691 CHMP1AQ9HD42 196 aaPredicted RBP2.45□□□□□ -2.02
SKP1-204ENST00000517691 DNAJC4Q9NNZ3 241 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 SLC52A3Q9NQ40 469 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 ZFP57Q9NU63 452 aa2.45□□□□□ -2.02
SKP1-204ENST00000517691 THUMPD1Q9NXG2 353 aaKnown RBP2.45□□□□□ -2.02
SKP1-204ENST00000517691 SLC25A37Q9NYZ2 338 aa2.45□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms