RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 A0A1B0GW64 132 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 A0A1W2PPH5 198 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 ASPDHA6ND91 283 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 TVP23AA6NH52 213 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR5H14A6NHG9 310 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 HSPB2A8KAH6 182 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 NPIPA5E9PKD4 350 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 NPIPA3F8WFD2 350 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 TRAPPC2LH3BP13 241 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 FAAHO00519 579 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 KCNQ2O43526 872 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 SRPX2O60687 465 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 SYNGR4O95473 234 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 SCGB1D1O95968 90 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 KNG1P01042 644 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 C4BPAP04003 597 aaKnown RBP4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 CSN2P05814 226 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 HLA-DOAP06340 250 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 UMODP07911 640 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 CD14P08571 375 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 SNRPCP09234 159 aaKnown RBP4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 RAB40ALP0C0E4 278 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 LINC00032P0C843 101 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 CT45A8P0DMV1 189 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 CT45A9P0DMV2 189 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM225BP0DP42 221 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 IRF2P14316 349 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF7P17097 686 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 CSNK2A2P19784 350 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 SAT1P21673 171 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZBTB25P24278 435 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 CHATP28329 748 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 CHRNB4P30926 498 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 CORO1AP31146 461 aaKnown RBP4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 MC4RP32245 332 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 GJA4P35212 333 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 ACVRL1P37023 503 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 COMPP49747 757 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 RAB28P51157 221 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 POLR2HP52434 150 aaKnown RBP4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 EFNA3P52797 238 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 HMGA2P52926 109 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 CDH12P55289 794 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 MTPNP58546 118 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 TAS2R43P59537 309 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 MAXP61244 160 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 WDR5P61964 334 aaKnown RBP4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 EFNB1P98172 346 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 FABP5Q01469 135 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 IRF8Q02556 426 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 PRDX4Q13162 271 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 CLINT1Q14677 625 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 PTPRCAPQ14761 206 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 PTGES3Q15185 160 aaKnown RBP4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 TEAD2Q15562 447 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR4D1Q15615 310 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 HSPB2Q16082 182 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 SYPL1Q16563 259 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 MORN2Q502X0 79 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 CT45A2Q5DJT8 189 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 XKR7Q5GH72 579 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 COA6Q5JTJ3 125 aaKnown RBP4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 C6orf136Q5SQH8 315 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 PLEKHS1Q5SXH7 462 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 HENMT1Q5T8I9 393 aaKnown RBP4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 PIP5KL1Q5T9C9 394 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 APOBEC3HQ6NTF7 200 aaKnown RBP4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 IL27RAQ6UWB1 636 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 ABHD15Q6UXT9 468 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC25A26Q70HW3 274 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 KCTD9Q7L273 389 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 VTCN1Q7Z7D3 282 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 MARCH9Q86YJ5 346 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF100Q8IYN0 542 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 KIR2DL5AQ8N109 375 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR11G2Q8NGC1 345 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR52B6Q8NGF0 335 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR10W1Q8NGF6 305 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR52M1Q8NGK5 317 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 OR4S2Q8NH73 311 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 STAG3L4Q8TBR4 150 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 RAB40AQ8WXH6 277 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 THAP4Q8WY91 577 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM234Q8WY98 164 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 GHSRQ92847 366 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 MCHR2Q969V1 340 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 MVB12AQ96EY5 273 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 CPNE2Q96FN4 548 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 ZNF479Q96JC4 524 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM56Q96MV1 263 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 TGM7Q96PF1 710 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 PANX1Q96RD7 426 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 COPS8Q99627 209 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 SMAD5Q99717 465 aaKnown RBP4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 HIST1H2BLQ99880 126 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 OMDQ99983 421 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 TBL1YQ9BQ87 522 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 TMEM47Q9BQJ4 181 aa4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 SLC25A21Q9BQT8 299 aaPredicted RBP4.36□□□□□ -1.71
HMGB1P19-201ENST00000517578 RHNO1Q9BSD3 238 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms