RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 CLN3Q13286 438 aa10.1□□□□□ -0.79
TRIM41-209ENST00000515834 EXOSC2Q13868 293 aaKnown RBP10.1□□□□□ -0.79
TRIM41-209ENST00000515834 PLAC9Q5JTB6 97 aa10.1□□□□□ -0.79
TRIM41-209ENST00000515834 LRRC28Q86X40 367 aaPredicted RBP10.1□□□□□ -0.79
TRIM41-209ENST00000515834 TAAR9Q96RI9 348 aa10.1□□□□□ -0.79
TRIM41-209ENST00000515834 CHST11Q9NPF2 352 aa10.1□□□□□ -0.79
TRIM41-209ENST00000515834 SLC23A1Q9UHI7 598 aa10.1□□□□□ -0.79
TRIM41-209ENST00000515834 USP22Q9UPT9 525 aa10.1□□□□□ -0.79
TRIM41-209ENST00000515834 CCDC187A0A096LP49 1063 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 BMP2P12643 396 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 NPY4RP50391 375 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 BTG2P78543 158 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 RGS7BPQ6MZT1 257 aaPredicted RBP10.09□□□□□ -0.79
TRIM41-209ENST00000515834 ABHD17CQ6PCB6 329 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 SMOC1Q9H4F8 434 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 EIF2DP41214 584 aaKnown RBP10.09□□□□□ -0.79
TRIM41-209ENST00000515834 PMPCAQ10713 525 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 TRMT12Q53H54 448 aaKnown RBP10.09□□□□□ -0.79
TRIM41-209ENST00000515834 CD300LGQ6UXG3 332 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 OR51A4Q8NGJ6 313 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 OR51A2Q8NGJ7 313 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 SLC25A43Q8WUT9 341 aaPredicted RBP10.09□□□□□ -0.79
TRIM41-209ENST00000515834 CXCL16Q9H2A7 254 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 NRIP3Q9NQ35 241 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 RPS10-NUDT3A0A1W2PQS6 291 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 RPS10P46783 165 aaKnown RBP10.09□□□□□ -0.79
TRIM41-209ENST00000515834 ZNF133P52736 654 aaPredicted RBP10.09□□□□□ -0.79
TRIM41-209ENST00000515834 PPP2CBP62714 309 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 RPS25P62851 125 aaKnown RBP10.09□□□□□ -0.79
TRIM41-209ENST00000515834 PPP2CAP67775 309 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 DESI1Q6ICB0 168 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 PLXDC2Q6UX71 529 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 CMTM4Q8IZR5 234 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 BCORP1Q8N888 145 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 RDH5Q92781 318 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 SLC39A13Q96H72 371 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 ATOH8Q96SQ7 321 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 GORASP2Q9H8Y8 452 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 OSGIN1Q9UJX0 560 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 FBXL2Q9UKC9 423 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 COPS3Q9UNS2 423 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 AQP7P3A6NL99 342 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 H0YIV9 168 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 ICOSLGO75144 302 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 OPRL1P41146 370 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 SIX1Q15475 284 aaPredicted RBP10.09□□□□□ -0.79
TRIM41-209ENST00000515834 BCDIN3DQ7Z5W3 292 aaKnown RBP10.09□□□□□ -0.79
TRIM41-209ENST00000515834 CDC20BQ86Y33 519 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 SLC16A11Q8NCK7 471 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 CHST8Q9H2A9 424 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 PLSCR3Q9NRY6 295 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 I6L893 689 aaPredicted RBP10.09□□□□□ -0.79
TRIM41-209ENST00000515834 OR2J3O76001 311 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 ZGLP1P0C6A0 271 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 CT45A10P0DMU9 189 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 TACR1P25103 407 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 SHC1P29353 583 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 SEMA4GQ9NTN9 838 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 ARID1BQ8NFD5 2236 aaPredicted RBP10.09□□□□□ -0.79
TRIM41-209ENST00000515834 DSCR3O14972 297 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 ABLIM3O94929 683 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 RPL27P61353 136 aaKnown RBP10.09□□□□□ -0.79
TRIM41-209ENST00000515834 ZNF385BQ569K4 471 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 PAQR9Q6ZVX9 377 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 BAGE3Q86Y29 109 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 BAGE2Q86Y30 109 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 GABRG1Q8N1C3 465 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 ZNRF4Q8WWF5 429 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 ST8SIA2Q92186 375 aa10.09□□□□□ -0.79
TRIM41-209ENST00000515834 TNFRSF10CO14798 259 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 CDC14BO60729 498 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 UPK1BO75841 260 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 ST6GAL1P15907 406 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 YOD1Q5VVQ6 348 aaPredicted RBP10.08□□□□□ -0.8
TRIM41-209ENST00000515834 METRNLQ641Q3 311 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 RPL7L1Q6DKI1 246 aaKnown RBP10.08□□□□□ -0.8
TRIM41-209ENST00000515834 ALKAL1Q6UXT8 129 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 Q96M85 177 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 LTB4R2Q9NPC1 389 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 POLDIP2Q9Y2S7 368 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 SLCO1B1Q9Y6L6 691 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 LRIT2A6NDA9 550 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 GALR2O43603 387 aaPredicted RBP10.08□□□□□ -0.8
TRIM41-209ENST00000515834 GFERP55789 205 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 OR11A1Q9GZK7 315 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 ZFP92A6NM28 416 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 CD14P08571 375 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 GIPRP48546 466 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 ZNF534Q76KX8 674 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 SPEM1Q8N4L4 309 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 WDR31Q8NA23 367 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 OR51E1Q8TCB6 317 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 FGF14Q92915 247 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 FAM122AQ96E09 287 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 SORT1Q99523 831 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 NDFIP1Q9BT67 221 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 C4BP0C0L5 1744 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 HOXC11O43248 304 aaPredicted RBP10.08□□□□□ -0.8
TRIM41-209ENST00000515834 XRCC3O43542 346 aa10.08□□□□□ -0.8
TRIM41-209ENST00000515834 ITGAMP11215 1152 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms