RNA–Protein interactions for RNA: ENST00000514006.1

CALCOCO2-222, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 2

Gene CALCOCO2, Length 500 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-222ENST00000514006 CFAP45Q9UL16 551 aa3.63□□□□□ -1.83
CALCOCO2-222ENST00000514006 RCL1Q9Y2P8 373 aaKnown RBP3.63□□□□□ -1.83
CALCOCO2-222ENST00000514006 YARS2Q9Y2Z4 477 aaKnown RBP3.63□□□□□ -1.83
CALCOCO2-222ENST00000514006 AK9Q5TCS8 1911 aa3.63□□□□□ -1.83
CALCOCO2-222ENST00000514006 TRAV6A0A075B6T7 132 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 TRAV39A0A0B4J263 110 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 PSMB11A5LHX3 300 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 SMKR1H3BMG3 65 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 H3BNH8 94 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 KDELR3O43731 214 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 ICOSLGO75144 302 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 SUPT7LO94864 414 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 PAHP00439 452 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 CGAP01215 116 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 HPNP05981 417 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 CT45A6P0DMU7 189 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 CT45A5P0DMU8 189 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 CT45A7P0DMV0 189 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 PMCHP20382 165 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 NBL1P41271 181 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 CCNG1P51959 295 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 CDH17Q12864 832 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 GGTLC2Q14390 218 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 OR7A5Q15622 319 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 ZBED5Q49AG3 693 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 CT45A1Q5HYN5 189 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 PAGE3Q5JUK9 113 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 SLC25A30Q5SVS4 291 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 CCNJQ5T5M9 372 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 SLC25A25Q6KCM7 469 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 ZNF547Q8IVP9 402 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 FAM58AQ8N1B3 248 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 TRAM1L1Q8N609 369 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 TRIML2Q8N7C3 387 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 ASCC1Q8N9N2 400 aaKnown RBP3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 FBXO36Q8NEA4 188 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 OR4F15Q8NGB8 312 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 OR4A15Q8NGL6 344 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 OR10G9Q8NGN4 311 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 CT45A3Q8NHU0 189 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 LKAAEAR1Q8TD35 194 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 NDRG1Q92597 394 aaKnown RBP3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 CIDECQ96AQ7 238 aaPredicted RBP3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 NRIP2Q9BQI9 281 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 NXF3Q9H4D5 531 aaKnown RBP3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 TMEM38AQ9H6F2 299 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 CLN6Q9NWW5 311 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 FLVCR2Q9UPI3 526 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 PLEKHG1Q9ULL1 1385 aa3.62□□□□□ -1.83
CALCOCO2-222ENST00000514006 SCN2AQ99250 2005 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 A0A0G2JN53 185 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 TSPAN11A1L157 253 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 PRSS37A4D1T9 235 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 HIDE1A8MVS5 230 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 ZNF879B4DU55 563 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 PLPP1O14494 284 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 PHOX2AO14813 284 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 NUPL2O15504 423 aaKnown RBP3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 XRCC2O43543 280 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 FAM189A1O60320 539 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 SRP72O76094 671 aaKnown RBP3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 UTS2O95399 124 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 C6orf47O95873 294 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 ARG1P05089 322 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 GABRR2P28476 465 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 GPX4P36969 197 aaPredicted RBP3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 RBMXP38159 391 aaKnown RBP3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 RFC3P40938 356 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 FGF8P55075 233 aaPredicted RBP3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 RPS21P63220 83 aaKnown RBP3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 XIAPP98170 497 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 ORC2Q13416 577 aaPredicted RBP3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 ZNF726P1Q15940 193 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 GABRA6Q16445 453 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 RPEL1Q2QD12 228 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 C9orf129Q5T035 196 aaKnown RBP3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 C6orf89Q6UWU4 347 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 OR13C9Q8NGT0 318 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 ZNF596Q8TC21 504 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 ISOC2Q96AB3 205 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 MSANTD3Q96H12 275 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 TMEM101Q96IK0 257 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 PLEKHF1Q96S99 279 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 RASL11BQ9BPW5 248 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 GABARAPL3Q9BY60 117 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 EML4Q9HC35 981 aaKnown RBP3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 PRSS16Q9NQE7 514 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 CTPS2Q9NRF8 586 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 KPTNQ9Y664 436 aa3.61□□□□□ -1.83
CALCOCO2-222ENST00000514006 LOC100506127A0A0U1RQW1 187 aa3.6□□□□□ -1.83
CALCOCO2-222ENST00000514006 LINC00854A0A1B0GVQ3 168 aa3.6□□□□□ -1.83
CALCOCO2-222ENST00000514006 PSMD11O00231 422 aa3.6□□□□□ -1.83
CALCOCO2-222ENST00000514006 POLR1CO15160 346 aaPredicted RBP3.6□□□□□ -1.83
CALCOCO2-222ENST00000514006 RAD51CO43502 376 aa3.6□□□□□ -1.83
CALCOCO2-222ENST00000514006 TNFSF13O75888 250 aa3.6□□□□□ -1.83
CALCOCO2-222ENST00000514006 DCNP07585 359 aaKnown RBP3.6□□□□□ -1.83
CALCOCO2-222ENST00000514006 HOXB8P17481 243 aaPredicted RBP3.6□□□□□ -1.83
CALCOCO2-222ENST00000514006 HRH1P35367 487 aa3.6□□□□□ -1.83
CALCOCO2-222ENST00000514006 CFHR2P36980 270 aa3.6□□□□□ -1.83
CALCOCO2-222ENST00000514006 SLC26A3P40879 764 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms