RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 IL19Q9UHD0 177 aa10.07□□□□□ -0.8
PTPN20-229ENST00000513756 TET2Q6N021 2002 aaPredicted RBP10.07□□□□□ -0.8
PTPN20-229ENST00000513756 DNAH3Q8TD57 4116 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 TNFRSF13BO14836 293 aaPredicted RBP10.06□□□□□ -0.8
PTPN20-229ENST00000513756 RNF13O43567 381 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 IGHG1P01857 330 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 SHBGP04278 402 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 PGA4P0DJD7 388 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 PGA3P0DJD8 388 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 VSIG8P0DPA2 414 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 LBPP18428 481 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 HTR2AP28223 471 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 PRKAR1BP31321 381 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 MVDP53602 400 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 NME5P56597 212 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 FGF12P61328 243 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 HNRNPA0Q13151 305 aaKnown RBP10.06□□□□□ -0.8
PTPN20-229ENST00000513756 SLC27A4Q6P1M0 643 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 ARL9Q6T311 187 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 VASH1Q7L8A9 365 aaPredicted RBP10.06□□□□□ -0.8
PTPN20-229ENST00000513756 ZSCAN4Q8NAM6 433 aaPredicted RBP10.06□□□□□ -0.8
PTPN20-229ENST00000513756 OR8B3Q8NGG8 313 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 BBS10Q8TAM1 723 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 GATAD2BQ8WXI9 593 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 DACT3Q96B18 629 aaPredicted RBP10.06□□□□□ -0.8
PTPN20-229ENST00000513756 NEIL1Q96FI4 390 aaPredicted RBP10.06□□□□□ -0.8
PTPN20-229ENST00000513756 OR8B2Q96RD0 313 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 RASSF4Q9H2L5 321 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 SIAEQ9HAT2 523 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 BCL2L10Q9HD36 194 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 SLC17A7Q9P2U7 560 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 PLXNB1O43157 2135 aa10.06□□□□□ -0.8
PTPN20-229ENST00000513756 C5orf58C9J3I9 102 aa10.05□□□□□ -0.8
PTPN20-229ENST00000513756 P2RY10O00398 339 aa10.05□□□□□ -0.8
PTPN20-229ENST00000513756 ANP32DO95626 131 aa10.05□□□□□ -0.8
PTPN20-229ENST00000513756 FAM153BP0C7A2 387 aa10.05□□□□□ -0.8
PTPN20-229ENST00000513756 GSTM3P21266 225 aa10.05□□□□□ -0.8
PTPN20-229ENST00000513756 UFM1P61960 85 aa10.05□□□□□ -0.8
PTPN20-229ENST00000513756 MELKQ14680 651 aa10.05□□□□□ -0.8
PTPN20-229ENST00000513756 CEP85LQ5SZL2 805 aa10.05□□□□□ -0.8
PTPN20-229ENST00000513756 RUSC1-AS1Q66K80 236 aa10.05□□□□□ -0.8
PTPN20-229ENST00000513756 ALDH16A1Q8IZ83 802 aa10.05□□□□□ -0.8
PTPN20-229ENST00000513756 FITM2Q8N6M3 262 aa10.05□□□□□ -0.8
PTPN20-229ENST00000513756 ITLN1Q8WWA0 313 aa10.05□□□□□ -0.8
PTPN20-229ENST00000513756 LRTOMTQ8WZ04 291 aa10.05□□□□□ -0.8
PTPN20-229ENST00000513756 MCHR2Q969V1 340 aa10.05□□□□□ -0.8
PTPN20-229ENST00000513756 TEX37Q96LM6 180 aa10.05□□□□□ -0.8
PTPN20-229ENST00000513756 TRIM15Q9C019 465 aa10.05□□□□□ -0.8
PTPN20-229ENST00000513756 TPT1P8Q9HAU6 139 aa10.05□□□□□ -0.8
PTPN20-229ENST00000513756 TMEM165Q9HC07 324 aa10.05□□□□□ -0.8
PTPN20-229ENST00000513756 NECAP2Q9NVZ3 263 aa10.05□□□□□ -0.8
PTPN20-229ENST00000513756 CLN8Q9UBY8 286 aa10.05□□□□□ -0.8
PTPN20-229ENST00000513756 LOC100509620A0A075B734 347 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 A0A0B4J2E0 115 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 A0A1B0GX12 115 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 CENPBD1B2RD01 187 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 LRRN3E7EW58 273 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 H0YL77 283 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 ENSAO43768 121 aaKnown RBP10.04□□□□□ -0.8
PTPN20-229ENST00000513756 ICMTO60725 284 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 HIST1H2ABP04908 130 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 ZCCHC18P0CG32 403 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 ETS2P15036 469 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 FUT4P22083 530 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 TUBG1P23258 451 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 RBMXP38159 391 aaKnown RBP10.04□□□□□ -0.8
PTPN20-229ENST00000513756 PITPNBP48739 271 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 PCBP3P57721 371 aaKnown RBP10.04□□□□□ -0.8
PTPN20-229ENST00000513756 PSG7Q13046 419 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 TAF11Q15544 211 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 OR1Q1Q15612 314 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 HIST3H3Q16695 136 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 SWT1Q5T5J6 900 aaKnown RBP10.04□□□□□ -0.8
PTPN20-229ENST00000513756 DHRS7BQ6IAN0 325 aaPredicted RBP10.04□□□□□ -0.8
PTPN20-229ENST00000513756 Q6ZSV7 163 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 RFPL4BQ6ZWI9 263 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 HIST3H2AQ7L7L0 130 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 HDDC2Q7Z4H3 204 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 KIRREL3Q8IZU9 778 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 EPS8L3Q8TE67 593 aaKnown RBP10.04□□□□□ -0.8
PTPN20-229ENST00000513756 HIST1H2ACQ93077 130 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 C4orf45Q96LM5 186 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 PCGF1Q9BSM1 259 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 SPATA5L1Q9BVQ7 753 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 NUF2Q9BZD4 464 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 DPAGT1Q9H3H5 408 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 TUBG2Q9NRH3 451 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 ACOXLQ9NUZ1 547 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 TAS2R5Q9NYW4 299 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 COL7A1Q02388 2944 aa10.04□□□□□ -0.8
PTPN20-229ENST00000513756 PHYHO14832 338 aa10.03□□□□□ -0.8
PTPN20-229ENST00000513756 FSTL3O95633 263 aa10.03□□□□□ -0.8
PTPN20-229ENST00000513756 IGHV4-59P01825 116 aa10.03□□□□□ -0.8
PTPN20-229ENST00000513756 IL6P05231 212 aa10.03□□□□□ -0.8
PTPN20-229ENST00000513756 BPGMP07738 259 aa10.03□□□□□ -0.8
PTPN20-229ENST00000513756 THRBP10828 461 aa10.03□□□□□ -0.8
PTPN20-229ENST00000513756 ZNF32P17041 273 aa10.03□□□□□ -0.8
PTPN20-229ENST00000513756 IL12AP29459 219 aa10.03□□□□□ -0.8
PTPN20-229ENST00000513756 IER3P46695 156 aa10.03□□□□□ -0.8
PTPN20-229ENST00000513756 MMP16P51512 607 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms