RNA–Protein interactions for RNA: ENST00000513643.5

RNF4-221, Transcript of ring finger protein 4, humanhuman

TSL 3

Gene RNF4, Length 516 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-221ENST00000513643 RAP2AP10114 183 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 ZNF32P17041 273 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 LAP3P28838 519 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 RPL4P36578 427 aaKnown RBP8.36□□□□□ -1.07
RNF4-221ENST00000513643 IFNGR2P38484 337 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 CAPZA2P47755 286 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 PPOXP50336 477 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 EFNA4P52798 201 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 KRTAP1-1Q07627 177 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 CD47Q08722 323 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 DAG1Q14118 895 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 DNAL1Q4LDG9 190 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 OR2T5Q6IEZ7 315 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 ZNF620Q6ZNG0 422 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 SLC30A7Q8NEW0 376 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 OR2T29Q8NH02 315 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 GNPDA2Q8TDQ7 276 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 NSMAFQ92636 917 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 MRPL24Q96A35 216 aaKnown RBP8.36□□□□□ -1.07
RNF4-221ENST00000513643 RASD2Q96D21 266 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 ZNF570Q96NI8 536 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 SMR3AQ99954 134 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 KCNS3Q9BQ31 491 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 ZNF416Q9BWM5 594 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 CHID1Q9BWS9 393 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 DGCR6LQ9BY27 220 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 CADM1Q9BY67 442 aaKnown RBP8.36□□□□□ -1.07
RNF4-221ENST00000513643 WNT5BQ9H1J7 359 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 OR52D1Q9H346 318 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 KRCC1Q9NPI7 259 aaPredicted RBP8.36□□□□□ -1.07
RNF4-221ENST00000513643 IL20RAQ9UHF4 553 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 FBXO9Q9UK97 447 aaPredicted RBP8.36□□□□□ -1.07
RNF4-221ENST00000513643 AURKCQ9UQB9 309 aa8.36□□□□□ -1.07
RNF4-221ENST00000513643 IGLV1-36A0A0B4J1U3 117 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 ARRDC5A6NEK1 342 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 VWC2LB2RUY7 222 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 H7C1C5 153 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 DCTN6O00399 190 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 BHLHE40O14503 412 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 GYG2O15488 501 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 GPRIN2O60269 458 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 OR10H3O60404 316 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 DNAJC8O75937 253 aaPredicted RBP8.35□□□□□ -1.07
RNF4-221ENST00000513643 PTHP01270 115 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 GAAP10253 952 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 COX5BP10606 129 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 BMP4P12644 408 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 ZNF250P15622 560 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 HOXB6P17509 224 aaKnown RBP8.35□□□□□ -1.07
RNF4-221ENST00000513643 MSR1P21757 451 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 RPS6KA3P51812 740 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 DSCR9P59020 149 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 LSM6P62312 80 aaKnown RBP8.35□□□□□ -1.07
RNF4-221ENST00000513643 LCN6P62502 163 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 HIST1H3AP68431 136 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 SNTB2Q13425 540 aaKnown RBP8.35□□□□□ -1.07
RNF4-221ENST00000513643 KRR1Q13601 381 aaKnown RBP8.35□□□□□ -1.07
RNF4-221ENST00000513643 RAB35Q15286 201 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 MICAQ29983 383 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 FAM98BQ52LJ0 330 aaKnown RBP8.35□□□□□ -1.07
RNF4-221ENST00000513643 PABPC1L2AQ5JQF8 200 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 HIST2H3PS2Q5TEC6 136 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 TMEM53Q6P2H8 277 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 UGT2A3Q6UWM9 527 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 RASSF6Q6ZTQ3 369 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 HIST2H3AQ71DI3 136 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 ZBTB46Q86UZ6 589 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 OR6V1Q8N148 313 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 LRRC18Q8N456 261 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 NPEPL1Q8NDH3 523 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 OR9Q2Q8NGE9 314 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 CANT1Q8WVQ1 401 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 SLCO4A1Q96BD0 722 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 SAMD8Q96LT4 415 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 SORCS2Q96PQ0 1159 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 REG4Q9BYZ8 158 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 MRPL37Q9BZE1 423 aaKnown RBP8.35□□□□□ -1.07
RNF4-221ENST00000513643 OR2H1Q9GZK4 316 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 NDEL1Q9GZM8 345 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 NUAK2Q9H093 628 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 SYT4Q9H2B2 425 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 SLC7A8Q9UHI5 535 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 TMCC3Q9ULS5 477 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 POMPQ9Y244 141 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 TIMM10BQ9Y5J6 103 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 CDH10Q9Y6N8 788 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 PMF1-BGLAPU3KQ54 211 aa8.35□□□□□ -1.07
RNF4-221ENST00000513643 IGHV4-30-2A0A087WSY4 118 aa8.34□□□□□ -1.07
RNF4-221ENST00000513643 VSTM5A8MXK1 200 aa8.34□□□□□ -1.07
RNF4-221ENST00000513643 XKRYO14609 159 aa8.34□□□□□ -1.07
RNF4-221ENST00000513643 KHDRBS3O75525 346 aaKnown RBP8.34□□□□□ -1.07
RNF4-221ENST00000513643 PPP1R3DO95685 299 aa8.34□□□□□ -1.07
RNF4-221ENST00000513643 HIST1H1CP16403 213 aaKnown RBP8.34□□□□□ -1.07
RNF4-221ENST00000513643 STOMP27105 288 aa8.34□□□□□ -1.07
RNF4-221ENST00000513643 APEX1P27695 318 aaKnown RBP8.34□□□□□ -1.07
RNF4-221ENST00000513643 SLC6A6P31641 620 aa8.34□□□□□ -1.07
RNF4-221ENST00000513643 WNT5AP41221 380 aa8.34□□□□□ -1.07
RNF4-221ENST00000513643 UCP2P55851 309 aa8.34□□□□□ -1.07
RNF4-221ENST00000513643 PCBD1P61457 104 aa8.34□□□□□ -1.07
RNF4-221ENST00000513643 SNRPD2P62316 118 aaKnown RBP8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms