RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 MLLT11Q13015 90 aaPredicted RBP3.87□□□□□ -1.79
VCAN-209ENST00000513016 AQP6Q13520 282 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 GSG1Q2KHT4 349 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 SAXO2Q658L1 398 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 TFAP2EQ6VUC0 442 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 OR1L3Q8NH93 324 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 ZNF799Q96GE5 643 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 SMOC1Q9H4F8 434 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 EME2A4GXA9 379 aaPredicted RBP3.87□□□□□ -1.79
VCAN-209ENST00000513016 IMPA2O14732 288 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 PPM1DO15297 605 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 NRASP01111 189 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 GYPBP06028 91 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 TUBG1P23258 451 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 ZNF93P35789 620 aaPredicted RBP3.87□□□□□ -1.79
VCAN-209ENST00000513016 PRRX1P54821 245 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 RPS16P62249 146 aaKnown RBP3.87□□□□□ -1.79
VCAN-209ENST00000513016 INSM1Q01101 510 aaPredicted RBP3.87□□□□□ -1.79
VCAN-209ENST00000513016 ISXQ2M1V0 245 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 Q499Y3 187 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 NADK2Q4G0N4 442 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 TRAT1Q6PIZ9 186 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 PNPLA5Q7Z6Z6 429 aaPredicted RBP3.87□□□□□ -1.79
VCAN-209ENST00000513016 ZNF441Q8N8Z8 693 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 PLPP5Q8NEB5 264 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 OR4M1Q8NGD0 313 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 TAMM41Q96BW9 452 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 FOXN4Q96NZ1 517 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 TXN2Q99757 166 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 DDA1Q9BW61 102 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 SLAMF8Q9P0V8 285 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 MYEF2Q9P2K5 600 aaKnown RBP3.87□□□□□ -1.79
VCAN-209ENST00000513016 ERRFI1Q9UJM3 462 aaPredicted RBP3.87□□□□□ -1.79
VCAN-209ENST00000513016 ETV7Q9Y603 341 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 BHLHE40O14503 412 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 OR8U8P0C7N1 319 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 POU3F3P20264 500 aaPredicted RBP3.87□□□□□ -1.79
VCAN-209ENST00000513016 SLC6A12P48065 614 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 SOX8P57073 446 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 MEP1BQ16820 701 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 CCSMST1Q4G0I0 132 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 YIF1BQ5BJH7 314 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 RNLSQ5VYX0 342 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 OR52W1Q6IF63 320 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 TSEN54Q7Z6J9 526 aaKnown RBP3.87□□□□□ -1.79
VCAN-209ENST00000513016 SYT9Q86SS6 491 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 LINC00346Q8IVM7 164 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 OR2L13Q8N349 312 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 ROBO4Q8WZ75 1007 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 FGGYQ96C11 551 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 MALSU1Q96EH3 234 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 FOXB1Q99853 325 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 MS4A5Q9H3V2 200 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 BARX1Q9HBU1 254 aaPredicted RBP3.87□□□□□ -1.79
VCAN-209ENST00000513016 SSC5DA1L4H1 1573 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 RPS10-NUDT3A0A1W2PQS6 291 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 OR5H14A6NHG9 310 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 OR5H1A6NKK0 313 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 NOTOA8MTQ0 251 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 ATXN7O15265 892 aaPredicted RBP3.87□□□□□ -1.79
VCAN-209ENST00000513016 FZD6O60353 706 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 MYF5P13349 255 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 MYF6P23409 242 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 HTR1FP30939 366 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 SDHAP31040 664 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 ZNF83P51522 516 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 DEFA5Q01523 94 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 KLRB1Q12918 225 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 NFATC3Q12968 1075 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 SQSTM1Q13501 440 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 HNF4GQ14541 408 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 VMA21Q3ZAQ7 101 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 PRAMEF5Q5TYX0 476 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 PRAMEF6Q5VXH4 476 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 CLEC2AQ6UVW9 174 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 CREB3L2Q70SY1 520 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 KANSL1Q7Z3B3 1105 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 C12orf45Q8N5I9 185 aaPredicted RBP3.87□□□□□ -1.79
VCAN-209ENST00000513016 OR10J5Q8NHC4 309 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 SDSLQ96GA7 329 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 NDFIP1Q9BT67 221 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 CXCL16Q9H2A7 254 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 NUBP2Q9Y5Y2 271 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 TIAM2Q8IVF5 1701 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 USP54Q70EL1 1684 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 OR2A25A4D2G3 310 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 PPT1P50897 306 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 AKR1D1P51857 326 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 PRTGQ2VWP7 1150 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 ELFN2Q5R3F8 820 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 PLXDC2Q6UX71 529 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 FAM71CQ8NEG0 241 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 NMNAT3Q96T66 252 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 BEX2Q9BXY8 128 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 TXNIPQ9H3M7 391 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 ZNF768Q9H5H4 540 aaKnown RBP3.87□□□□□ -1.79
VCAN-209ENST00000513016 BEX1Q9HBH7 125 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 FBXO8Q9NRD0 319 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 C1orf123Q9NWV4 160 aa3.87□□□□□ -1.79
VCAN-209ENST00000513016 LAMP3Q9UQV4 416 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms