RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 CD300LFQ8TDQ1 290 aa1.99□□□□□ -2.09
CHD1-207ENST00000511628 MCUR1Q96AQ8 359 aa1.99□□□□□ -2.09
CHD1-207ENST00000511628 TSNARE1Q96NA8 513 aa1.99□□□□□ -2.09
CHD1-207ENST00000511628 TSSK3Q96PN8 268 aa1.99□□□□□ -2.09
CHD1-207ENST00000511628 TAAR1Q96RJ0 339 aa1.99□□□□□ -2.09
CHD1-207ENST00000511628 SH3GL3Q99963 347 aa1.99□□□□□ -2.09
CHD1-207ENST00000511628 C11orf70Q9BRQ4 267 aa1.99□□□□□ -2.09
CHD1-207ENST00000511628 PLA2G2FQ9BZM2 168 aa1.99□□□□□ -2.09
CHD1-207ENST00000511628 BEX1Q9HBH7 125 aa1.99□□□□□ -2.09
CHD1-207ENST00000511628 RETNQ9HD89 108 aa1.99□□□□□ -2.09
CHD1-207ENST00000511628 GPATCH2LQ9NWQ4 482 aa1.99□□□□□ -2.09
CHD1-207ENST00000511628 NUFIP1Q9UHK0 495 aaKnown RBP1.99□□□□□ -2.09
CHD1-207ENST00000511628 RAB26Q9ULW5 256 aa1.99□□□□□ -2.09
CHD1-207ENST00000511628 PSG8Q9UQ74 426 aa1.99□□□□□ -2.09
CHD1-207ENST00000511628 DENND4AQ7Z401 1863 aa1.99□□□□□ -2.09
CHD1-207ENST00000511628 WDR19Q8NEZ3 1342 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 CENPJQ9HC77 1338 aaPredicted RBP1.98□□□□□ -2.09
CHD1-207ENST00000511628 A0A096LNJ9 63 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 TRBV9A0A0B4J1U6 114 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 TRAV39A0A0B4J263 110 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 A0A0B4J2A0 478 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 A0A1B0GW55 424 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 TMX2-CTNND1H3BSU7 103 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 SIRPB1O00241 398 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 DYNC1I1O14576 645 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 XKRYO14609 159 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 SLC25A27O95847 323 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 TLX1NBP0CAT3 122 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 DUX4L2P0CJ85 424 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 DUX4L3P0CJ86 424 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 DUX4L5P0CJ88 424 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 DUX4L6P0CJ89 424 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 DUX4L7P0CJ90 424 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 SMIM10L1P0DMW3 83 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 GTF2E2P29084 291 aaKnown RBP1.98□□□□□ -2.09
CHD1-207ENST00000511628 RRM2P31350 389 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 OTX1P32242 354 aaPredicted RBP1.98□□□□□ -2.09
CHD1-207ENST00000511628 GPX4P36969 197 aaPredicted RBP1.98□□□□□ -2.09
CHD1-207ENST00000511628 SLC1A1P43005 524 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 RPS5P46782 204 aaKnown RBP1.98□□□□□ -2.09
CHD1-207ENST00000511628 RGS8P57771 180 aaPredicted RBP1.98□□□□□ -2.09
CHD1-207ENST00000511628 IRF8Q02556 426 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 MERTKQ12866 999 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 ITIH4Q14624 930 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 POU2AF1Q16633 256 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 PTPN20Q4JDL3 420 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 TFDP3Q5H9I0 405 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 COA6Q5JTJ3 125 aaKnown RBP1.98□□□□□ -2.09
CHD1-207ENST00000511628 AGBL2Q5U5Z8 902 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 TMEM53Q6P2H8 277 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 Q6P435 159 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 TMEM179Q6ZVK1 233 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 BIVMQ86UB2 503 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 PQLC3Q8N755 202 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 OR4C5Q8NGB2 326 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 NUBPLQ8TB37 319 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 MARCH1Q8TCQ1 289 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 AGR3Q8TD06 166 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 STARD8Q92502 1023 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 FAM3DQ96BQ1 224 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 SMIM10Q96HG1 83 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 CEP170P1Q96L14 293 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 SERPINB12Q96P63 405 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 ECSITQ9BQ95 431 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 SLC25A39Q9BZJ4 359 aaPredicted RBP1.98□□□□□ -2.09
CHD1-207ENST00000511628 EXO5Q9H790 373 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 HRASLS2Q9NWW9 162 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 DUX4Q9UBX2 424 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 SHPKQ9UHJ6 478 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 ZNF223Q9UK11 482 aaPredicted RBP1.98□□□□□ -2.09
CHD1-207ENST00000511628 GOLT1BQ9Y3E0 138 aa1.98□□□□□ -2.09
CHD1-207ENST00000511628 MN1Q10571 1320 aaPredicted RBP1.97□□□□□ -2.09
CHD1-207ENST00000511628 TTC41PQ6P2S7 1318 aa1.97□□□□□ -2.09
CHD1-207ENST00000511628 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.97□□□□□ -2.09
CHD1-207ENST00000511628 IGLV1-36A0A0B4J1U3 117 aa1.97□□□□□ -2.09
CHD1-207ENST00000511628 ANKRD63C9JTQ0 380 aa1.97□□□□□ -2.09
CHD1-207ENST00000511628 K7EMT4 169 aa1.97□□□□□ -2.09
CHD1-207ENST00000511628 WRBO00258 174 aa1.97□□□□□ -2.09
CHD1-207ENST00000511628 NUPL2O15504 423 aaKnown RBP1.97□□□□□ -2.09
CHD1-207ENST00000511628 CLDN11O75508 207 aa1.97□□□□□ -2.09
CHD1-207ENST00000511628 SERPINE2P07093 398 aa1.97□□□□□ -2.09
CHD1-207ENST00000511628 ERCC1P07992 297 aaPredicted RBP1.97□□□□□ -2.09
CHD1-207ENST00000511628 ZDHHC11BP0C7U3 371 aa1.97□□□□□ -2.09
CHD1-207ENST00000511628 PNMA6AP0CW24 399 aaPredicted RBP1.97□□□□□ -2.09
CHD1-207ENST00000511628 STOMP27105 288 aa1.97□□□□□ -2.09
CHD1-207ENST00000511628 FOXN2P32314 431 aa1.97□□□□□ -2.09
CHD1-207ENST00000511628 NAMPTP43490 491 aa1.97□□□□□ -2.09
CHD1-207ENST00000511628 UQCRFS1P47985 274 aa1.97□□□□□ -2.09
CHD1-207ENST00000511628 CSNK1EP49674 416 aaKnown RBP1.97□□□□□ -2.09
CHD1-207ENST00000511628 ADARB1P78563 741 aaKnown RBP1.97□□□□□ -2.09
CHD1-207ENST00000511628 HMGCS1Q01581 520 aa1.97□□□□□ -2.09
CHD1-207ENST00000511628 TWF1Q12792 350 aa1.97□□□□□ -2.09
CHD1-207ENST00000511628 GGTLC2Q14390 218 aa1.97□□□□□ -2.09
CHD1-207ENST00000511628 CLINT1Q14677 625 aa1.97□□□□□ -2.09
CHD1-207ENST00000511628 HSDL1Q3SXM5 330 aa1.97□□□□□ -2.09
CHD1-207ENST00000511628 LCE1CQ5T751 118 aa1.97□□□□□ -2.09
CHD1-207ENST00000511628 LCE1BQ5T7P3 118 aa1.97□□□□□ -2.09
CHD1-207ENST00000511628 MBOAT1Q6ZNC8 495 aa1.97□□□□□ -2.09
CHD1-207ENST00000511628 TEX43Q6ZNM6 134 aa1.97□□□□□ -2.09
CHD1-207ENST00000511628 EIF3MQ7L2H7 374 aaKnown RBP1.97□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms