RNA–Protein interactions for RNA: ENST00000509101.1

CXCL1-202, Transcript of C-X-C motif chemokine ligand 1, humanhuman

TSL 3

Gene CXCL1, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-202ENST00000509101 CYSLTR2Q9NS75 346 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 TMEM106BQ9NUM4 274 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 VAPAQ9P0L0 249 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 ZNF229Q9UJW7 825 aa13.48□□□□□ -0.25
CXCL1-202ENST00000509101 POLR3KQ9Y2Y1 108 aaPredicted RBP13.48□□□□□ -0.25
CXCL1-202ENST00000509101 SOX21Q9Y651 276 aaPredicted RBP13.48□□□□□ -0.25
CXCL1-202ENST00000509101 TMEM120BA0PK00 339 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 A8MXK9 166 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 BLOC1S5-TXNDC5H3BN57 136 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 FMO6PO60774 539 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 LYPD3O95274 346 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 THY1P04216 161 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 HIST1H2ABP04908 130 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 F13BP05160 661 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 CD55P08174 381 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 ASAH2BP0C7U1 165 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 IGHV4-38-2P0DP08 117 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 PPIBP23284 216 aaKnown RBP13.47□□□□□ -0.25
CXCL1-202ENST00000509101 PCGF2P35227 344 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 GDI2P50395 445 aaKnown RBP13.47□□□□□ -0.25
CXCL1-202ENST00000509101 PPP1CBP62140 327 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 SRSF4Q08170 494 aaKnown RBP13.47□□□□□ -0.25
CXCL1-202ENST00000509101 ZMAT1Q5H9K5 638 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 C10orf128Q5T292 105 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 HIST3H2AQ7L7L0 130 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 PARP8Q8N3A8 854 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 OR6T1Q8NGN1 323 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 ASB10Q8WXI3 467 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 HIST1H2ACQ93077 130 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 TMIGD2Q96BF3 282 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 TMEM38AQ9H6F2 299 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 SIAEQ9HAT2 523 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 CGGBP1Q9UFW8 167 aaPredicted RBP13.47□□□□□ -0.25
CXCL1-202ENST00000509101 ZDHHC8Q9ULC8 765 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 SLC7A7Q9UM01 511 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 ANGPT4Q9Y264 503 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 DOCK11Q5JSL3 2073 aa13.47□□□□□ -0.25
CXCL1-202ENST00000509101 MDFIC2A0A1B0GVS7 189 aa13.46□□□□□ -0.25
CXCL1-202ENST00000509101 A0A1W2PRG6 482 aa13.46□□□□□ -0.25
CXCL1-202ENST00000509101 TIMM8AO60220 97 aaPredicted RBP13.46□□□□□ -0.25
CXCL1-202ENST00000509101 TRMUO75648 421 aaKnown RBP13.46□□□□□ -0.25
CXCL1-202ENST00000509101 LIPAP38571 399 aa13.46□□□□□ -0.25
CXCL1-202ENST00000509101 SLC6A9P48067 706 aa13.46□□□□□ -0.25
CXCL1-202ENST00000509101 STX1BP61266 288 aa13.46□□□□□ -0.25
CXCL1-202ENST00000509101 ERVK-25P63136 954 aa13.46□□□□□ -0.25
CXCL1-202ENST00000509101 MRPS34P82930 218 aaKnown RBP13.46□□□□□ -0.25
CXCL1-202ENST00000509101 RPL18Q07020 188 aaKnown RBP13.46□□□□□ -0.25
CXCL1-202ENST00000509101 TMEM155Q4W5P6 130 aa13.46□□□□□ -0.25
CXCL1-202ENST00000509101 PAGE3Q5JUK9 113 aa13.46□□□□□ -0.25
CXCL1-202ENST00000509101 UNQ6126/PRO20091Q6UXV3 157 aa13.46□□□□□ -0.25
CXCL1-202ENST00000509101 RBM45Q8IUH3 476 aaKnown RBP13.46□□□□□ -0.25
CXCL1-202ENST00000509101 OR52E2Q8NGJ4 325 aa13.46□□□□□ -0.25
CXCL1-202ENST00000509101 VANGL1Q8TAA9 524 aaPredicted RBP13.46□□□□□ -0.25
CXCL1-202ENST00000509101 ADAMTS16Q8TE57 1224 aa13.46□□□□□ -0.25
CXCL1-202ENST00000509101 NABP1Q96AH0 204 aa13.46□□□□□ -0.25
CXCL1-202ENST00000509101 SEPHS2Q99611 448 aa13.46□□□□□ -0.25
CXCL1-202ENST00000509101 MRPL13Q9BYD1 178 aaKnown RBP13.46□□□□□ -0.25
CXCL1-202ENST00000509101 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.46□□□□□ -0.25
CXCL1-202ENST00000509101 OR5V1Q9UGF6 321 aa13.46□□□□□ -0.25
CXCL1-202ENST00000509101 UGT2A1Q9Y4X1 527 aa13.46□□□□□ -0.25
CXCL1-202ENST00000509101 TRBV5-3A0A0A0MS03 114 aa13.45□□□□□ -0.26
CXCL1-202ENST00000509101 IGKV1D-43A0A0B4J1Z2 117 aa13.45□□□□□ -0.26
CXCL1-202ENST00000509101 F5H0A9 414 aaPredicted RBP13.45□□□□□ -0.26
CXCL1-202ENST00000509101 NGFP01138 241 aa13.45□□□□□ -0.26
CXCL1-202ENST00000509101 H2AFXP16104 143 aaPredicted RBP13.45□□□□□ -0.26
CXCL1-202ENST00000509101 ACADSP16219 412 aa13.45□□□□□ -0.26
CXCL1-202ENST00000509101 MTNR1AP48039 350 aa13.45□□□□□ -0.26
CXCL1-202ENST00000509101 BTG1P62324 171 aa13.45□□□□□ -0.26
CXCL1-202ENST00000509101 PSG4Q00888 419 aa13.45□□□□□ -0.26
CXCL1-202ENST00000509101 FMODQ06828 376 aa13.45□□□□□ -0.26
CXCL1-202ENST00000509101 ZMYND11Q15326 602 aa13.45□□□□□ -0.26
CXCL1-202ENST00000509101 TAF11Q15544 211 aa13.45□□□□□ -0.26
CXCL1-202ENST00000509101 SGCAQ16586 387 aa13.45□□□□□ -0.26
CXCL1-202ENST00000509101 DUSP7Q16829 419 aa13.45□□□□□ -0.26
CXCL1-202ENST00000509101 ESCO2Q56NI9 601 aa13.45□□□□□ -0.26
CXCL1-202ENST00000509101 MTX3Q5HYI7 312 aa13.45□□□□□ -0.26
CXCL1-202ENST00000509101 TSPYL5Q86VY4 417 aaPredicted RBP13.45□□□□□ -0.26
CXCL1-202ENST00000509101 FUNDC1Q8IVP5 155 aa13.45□□□□□ -0.26
CXCL1-202ENST00000509101 GPR32P1Q8NGA4 272 aa13.45□□□□□ -0.26
CXCL1-202ENST00000509101 OR4D11Q8NGI4 311 aa13.45□□□□□ -0.26
CXCL1-202ENST00000509101 WFDC12Q8WWY7 111 aa13.45□□□□□ -0.26
CXCL1-202ENST00000509101 SPDL1Q96EA4 605 aa13.45□□□□□ -0.26
CXCL1-202ENST00000509101 SLC19A3Q9BZV2 496 aa13.45□□□□□ -0.26
CXCL1-202ENST00000509101 CORO2BQ9UQ03 480 aa13.45□□□□□ -0.26
CXCL1-202ENST00000509101 TRAV40A0A0B4J280 105 aa13.44□□□□□ -0.26
CXCL1-202ENST00000509101 TRAPPC13A5PLN9 417 aa13.44□□□□□ -0.26
CXCL1-202ENST00000509101 EVPLLA8MZ36 301 aa13.44□□□□□ -0.26
CXCL1-202ENST00000509101 CENPBD1B2RD01 187 aa13.44□□□□□ -0.26
CXCL1-202ENST00000509101 H3BSA7 217 aa13.44□□□□□ -0.26
CXCL1-202ENST00000509101 KNG1P01042 644 aa13.44□□□□□ -0.26
CXCL1-202ENST00000509101 GPX2P18283 190 aa13.44□□□□□ -0.26
CXCL1-202ENST00000509101 DAP3P51398 398 aaKnown RBP13.44□□□□□ -0.26
CXCL1-202ENST00000509101 ZNF133P52736 654 aaPredicted RBP13.44□□□□□ -0.26
CXCL1-202ENST00000509101 UGT2B15P54855 530 aa13.44□□□□□ -0.26
CXCL1-202ENST00000509101 PCBP3P57721 371 aaKnown RBP13.44□□□□□ -0.26
CXCL1-202ENST00000509101 OCLNQ16625 522 aa13.44□□□□□ -0.26
CXCL1-202ENST00000509101 AGBL2Q5U5Z8 902 aa13.44□□□□□ -0.26
CXCL1-202ENST00000509101 C16orf87Q6PH81 154 aa13.44□□□□□ -0.26
CXCL1-202ENST00000509101 C9orf139Q6ZV77 190 aa13.44□□□□□ -0.26
CXCL1-202ENST00000509101 HDDC2Q7Z4H3 204 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms