RNA–Protein interactions for RNA: ENST00000508546.5

NEDD9-211, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 5

Gene NEDD9, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-211ENST00000508546 FADDQ13158 208 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 STX3Q13277 289 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 RGNQ15493 299 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 ESCO2Q56NI9 601 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 SPRNQ5BIV9 151 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 ZMAT1Q5H9K5 638 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 THEM4Q5T1C6 240 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 SWT1Q5T5J6 900 aaKnown RBP7.89□□□□□ -1.15
NEDD9-211ENST00000508546 ASPHD2Q6ICH7 369 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 DHRS4L2Q6PKH6 230 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 MSANTD1Q6ZTZ1 278 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 PIGWQ7Z7B1 504 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 COMTD1Q86VU5 262 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 ZNF101Q8IZC7 436 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 BHLHE22Q8NFJ8 381 aaPredicted RBP7.89□□□□□ -1.15
NEDD9-211ENST00000508546 KLF14Q8TD94 323 aaPredicted RBP7.89□□□□□ -1.15
NEDD9-211ENST00000508546 GEMIN6Q8WXD5 167 aaKnown RBP7.89□□□□□ -1.15
NEDD9-211ENST00000508546 UBE2FQ969M7 185 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 VPS33AQ96AX1 596 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 POM121L2Q96KW2 1035 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 RBM4BQ9BQ04 359 aaKnown RBP7.89□□□□□ -1.15
NEDD9-211ENST00000508546 SLC19A3Q9BZV2 496 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 TMEM27Q9HBJ8 222 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 TMEM106BQ9NUM4 274 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 DCAF16Q9NXF7 216 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 C1RLQ9NZP8 487 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 EIF3KQ9UBQ5 218 aaKnown RBP7.89□□□□□ -1.15
NEDD9-211ENST00000508546 OR5V1Q9UGF6 321 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 TRIM33Q9UPN9 1127 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 LRCH1Q9Y2L9 728 aa7.89□□□□□ -1.15
NEDD9-211ENST00000508546 SOX21Q9Y651 276 aaPredicted RBP7.89□□□□□ -1.15
NEDD9-211ENST00000508546 TRAV40A0A0B4J280 105 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 EBAG9O00559 213 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 SDHDO14521 159 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 HOXA3O43365 443 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-211ENST00000508546 ICMTO60725 284 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 OR6A2O95222 327 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 NUDT7P0C024 238 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 SELEP16581 610 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 STOMP27105 288 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 WNT5AP41221 380 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 SLC1A6P48664 564 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 ZNF84P51523 738 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 BPIFB3P59826 476 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 RPL15P61313 204 aaKnown RBP7.88□□□□□ -1.15
NEDD9-211ENST00000508546 BTG1P62324 171 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 TNFAIP6P98066 277 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-211ENST00000508546 RELBQ01201 579 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 HSF2Q03933 536 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 SF3A3Q12874 501 aaKnown RBP eCLIP7.88□□□□□ -1.15
NEDD9-211ENST00000508546 CDK5R2Q13319 367 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 HLXQ14774 488 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-211ENST00000508546 OR1Q1Q15612 314 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 HIST3H3Q16695 136 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 GTDC1Q4AE62 458 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 PABPC1L2AQ5JQF8 200 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 VAX1Q5SQQ9 334 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 SPATA46Q5T0L3 261 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 LRRN1Q6UXK5 716 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 LINC00114Q6XXX2 140 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 JAZF1Q86VZ6 243 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 TMEM86BQ8N661 226 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 C10orf53Q8N6V4 93 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 SLC25A40Q8TBP6 338 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 MAL2Q969L2 176 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 DACT3Q96B18 629 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-211ENST00000508546 ITCHQ96J02 903 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 SAMD8Q96LT4 415 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 SIGLEC11Q96RL6 698 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 DCLRE1CQ96SD1 692 aaKnown RBP7.88□□□□□ -1.15
NEDD9-211ENST00000508546 SPATA5L1Q9BVQ7 753 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 OR2J1Q9GZK6 312 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 RAD21L1Q9H4I0 556 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 RMND5AQ9H871 391 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 EVA1AQ9H8M9 152 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 THAP1Q9NVV9 213 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 TAS2R5Q9NYW4 299 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 ARL2BPQ9Y2Y0 163 aa7.88□□□□□ -1.15
NEDD9-211ENST00000508546 TET2Q6N021 2002 aaPredicted RBP7.88□□□□□ -1.15
NEDD9-211ENST00000508546 LOC100509620A0A075B734 347 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 IGHV3OR16-10A0A075B7F0 116 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 MDFIC2A0A1B0GVS7 189 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 CENPBD1B2RD01 187 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 C5orf58C9J3I9 102 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 RNF13O43567 381 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 TPST1O60507 370 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 TPST2O60704 377 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 CLPXO76031 633 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 TGDSO95455 350 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 IGHG1P01857 330 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 PRB2P02812 416 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-211ENST00000508546 WNT2P09544 360 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 TNFRSF1AP19438 455 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 CCNOP22674 350 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 MDH2P40926 338 aaKnown RBP7.87□□□□□ -1.15
NEDD9-211ENST00000508546 ZNF133P52736 654 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-211ENST00000508546 CDH12P55289 794 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 RGS8P57771 180 aaPredicted RBP7.87□□□□□ -1.15
NEDD9-211ENST00000508546 KRTAP10-3P60369 221 aa7.87□□□□□ -1.15
NEDD9-211ENST00000508546 PPP1CBP62140 327 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms