RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 NME2P22392 152 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 F8A1P23610 371 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CTSSP25774 331 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 PBX1P40424 430 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 WNT5AP41221 380 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 RPL5P46777 297 aaKnown RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 DUSP2Q05923 314 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 SSX2Q16385 188 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ASTE1Q2TB18 679 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 OR52W1Q6IF63 320 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 SPPL2CQ8IUH8 684 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 GID4Q8IVV7 300 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CRIPAKQ8N1N5 446 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 FAM83FQ8NEG4 500 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 DMBX1Q8NFW5 382 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 OR10Z1Q8NGY1 313 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 WDR20Q8TBZ3 569 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 LKAAEAR1Q8TD35 194 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 GNPDA2Q8TDQ7 276 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 GGHQ92820 318 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 MAELQ96JY0 434 aaKnown RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 MS4A7Q9GZW8 240 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 MED28Q9H204 178 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 IL17CQ9P0M4 197 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CDC42EP3Q9UKI2 254 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 USP22Q9UPT9 525 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 A0A1W2PQM1 296 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ACOT8O14734 319 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 FADS1O60427 444 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ADAP00813 363 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CD1DP15813 335 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 NCK1P16333 377 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF182P17025 639 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 SSTR4P31391 388 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 EDDM3AQ14507 147 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 PTGR1Q14914 329 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 SHBQ15464 509 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 AARDQ4LEZ3 155 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF468Q5VIY5 522 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF787Q6DD87 383 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 DPY19L2P1Q6NXN4 242 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 TMEM64Q6YI46 380 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 COLCA1Q6ZS62 124 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 KCTD9Q7L273 389 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 GLRX5Q86SX6 157 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 MEX3DQ86XN8 651 aaKnown RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 MARVELD2Q8N4S9 558 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CASTOR1Q8WTX7 329 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF480Q8WV37 535 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 RAB1CQ92928 201 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 PLPPR2Q96GM1 343 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 GPR137Q96N19 417 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 OR4K3Q96R72 315 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 MECRQ9BV79 373 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 OPN3Q9H1Y3 402 aaPredicted RBP2.69□□□□□ -1.98
NEDD4-208ENST00000508342 ANKRA2Q9H9E1 313 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 BCO1Q9HAY6 547 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 PNPOQ9NVS9 261 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 SIRT5Q9NXA8 310 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 NDUFAF4Q9P032 175 aa2.69□□□□□ -1.98
NEDD4-208ENST00000508342 CYR61O00622 381 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 ICOSLGO75144 302 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 ABHD2P08910 425 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 ARNTP27540 789 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 S100A2P29034 98 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 TIA1P31483 386 aaKnown RBP eCLIP2.68□□□□□ -1.98
NEDD4-208ENST00000508342 PITPNBP48739 271 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 KCNJ10P78508 379 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 SLC25A3Q00325 362 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 NKG7Q16617 165 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 HFEQ30201 348 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF718Q3SXZ3 478 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 ZNF684Q5T5D7 378 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 MOB3CQ70IA8 216 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 KANSL1Q7Z3B3 1105 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 DCXRQ7Z4W1 244 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 RBM15BQ8NDT2 890 aaKnown RBP2.68□□□□□ -1.98
NEDD4-208ENST00000508342 FAM57AQ8TBR7 257 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 FNDC8Q8TC99 324 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 NPRL2Q8WTW4 380 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 NMD3Q96D46 503 aaKnown RBP2.68□□□□□ -1.98
NEDD4-208ENST00000508342 GNRHR2Q96P88 292 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 GSX1Q9H4S2 264 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-208ENST00000508342 COMMD3Q9UBI1 195 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 FBXL3Q9UKT7 428 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 MKLN1Q9UL63 735 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 NUP214P35658 2090 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-208ENST00000508342 MED12Q93074 2177 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 KIF26BQ2KJY2 2108 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 MEGF11A6BM72 1044 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 SLC16A6O15403 523 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 SPINT2O43291 252 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 PRKRAO75569 313 aaKnown RBP2.68□□□□□ -1.98
NEDD4-208ENST00000508342 EML2O95834 649 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 MT-ND1P03886 318 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 BPGMP07738 259 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 TRA2BP62995 288 aaKnown RBP2.68□□□□□ -1.98
NEDD4-208ENST00000508342 PIGFQ07326 219 aa2.68□□□□□ -1.98
NEDD4-208ENST00000508342 HABP2Q14520 560 aaPredicted RBP2.68□□□□□ -1.98
NEDD4-208ENST00000508342 ATP6AP1Q15904 470 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms