RNA–Protein interactions for RNA: ENST00000508170.5

PDGFRA-206, Transcript of platelet derived growth factor receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene PDGFRA, Length 2,202 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRA-206ENST00000508170 SLC1A7O00341 560 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 EIF4E2O60573 245 aaKnown RBP6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 MED26O95402 600 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 RAB36O95755 333 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 SMIM6P0DI80 62 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 BDKRB1P46663 353 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 CLDN20P56880 219 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 SLC35B1P78383 322 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 GAGE2BQ13066 116 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 PRPSAP1Q14558 356 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 PHKG1Q16816 387 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 TRMT5Q32P41 509 aaKnown RBP6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 GAGE13Q4V321 117 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 GAGE2EQ4V326 116 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 CARD16Q5EG05 197 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 GAGE2AQ6NT46 116 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 ZNF774Q6NX45 483 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 FAM220AQ7Z4H9 259 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 SCCPDHQ8NBX0 429 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 SLC16A11Q8NCK7 471 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 OR10G3Q8NGC4 313 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 OR56A1Q8NGH5 318 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 TSACCQ96A04 125 aaPredicted RBP6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 TXNDC15Q96J42 360 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 KCTD7Q96MP8 289 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 RCC2Q9P258 522 aaKnown RBP6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 GAGE2DQ9UEU5 116 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 FBXO5Q9UKT4 447 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 SLC7A11Q9UPY5 501 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 PPP2R2CQ9Y2T4 447 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 MRPS18CQ9Y3D5 142 aaKnown RBP6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 COL18A1P39060 1754 aa6.61□□□□□ -1.35
PDGFRA-206ENST00000508170 MEGF6O75095 1541 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 AFDNP55196 1824 aaKnown RBP6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 TRAV8-7A0A075B6U6 113 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 A0A0A6YYD5 115 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 KIR2DS1A0A191URI9 304 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 SH2D1BO14796 132 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 SLC22A1O15245 554 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 DLEU1O43261 78 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 KHDRBS3O75525 346 aaKnown RBP6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 ATP5LO75964 103 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 KNG1P01042 644 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 TYMSP04818 313 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 UMODP07911 640 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 RAB3AP20336 220 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 OGNP20774 298 aaKnown RBP6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 ERP29P30040 261 aaKnown RBP6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 S100A7P31151 101 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 KLF5Q13887 457 aaPredicted RBP6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 KIR2DS1Q14954 304 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 UPP1Q16831 310 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 MED27Q6P2C8 311 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 SHC4Q6S5L8 630 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 TMEM64Q6YI46 380 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 TMEM184AQ6ZMB5 413 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 RBM44Q6ZP01 1051 aaKnown RBP6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 DTWD1Q8N5C7 304 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 DMBX1Q8NFW5 382 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 VN1R2Q8NFZ6 395 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 RNF138Q8WVD3 245 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 TMEM234Q8WY98 164 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 TEPSINQ96N21 525 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 FAIM2Q9BWQ8 316 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 RNF41Q9H4P4 317 aaPredicted RBP6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 KLHL31Q9H511 634 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 ARMC7Q9H6L4 198 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 FGF20Q9NP95 211 aaPredicted RBP6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 GDF3Q9NR23 364 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 PLEKHB1Q9UF11 243 aaPredicted RBP6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 PLA2G2DQ9UNK4 145 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 RCL1Q9Y2P8 373 aaKnown RBP6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 SAR1BQ9Y6B6 198 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 COLEC10Q9Y6Z7 277 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 PKD1L3Q7Z443 1732 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 PARP4Q9UKK3 1724 aaKnown RBP6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 LAMB4A4D0S4 1761 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 ARFGEF2Q9Y6D5 1785 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 FAM95CA0A1B0GW59 222 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 K7EP13 123 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 BHLHE40O14503 412 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 RGS16O15492 202 aaPredicted RBP6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 HOXA3O43365 443 aaPredicted RBP6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 MT-ND4P03905 459 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 GCAP28676 217 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 PHBP35232 272 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 GLP1RP43220 463 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 RAB7AP51149 207 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 CLDN6P56747 220 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 KCTD16Q68DU8 428 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 KIAA0895LQ68EN5 471 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 DCDC5Q6ZRR9 648 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 NPAS3Q8IXF0 933 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 RELL2Q8NC24 303 aaPredicted RBP6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 ADAMTS17Q8TE56 1095 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 SMAP2Q8WU79 429 aaPredicted RBP6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 NEU4Q8WWR8 484 aaPredicted RBP6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 ABTB1Q969K4 478 aaPredicted RBP6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 ZNF488Q96MN9 340 aa6.6□□□□□ -1.35
PDGFRA-206ENST00000508170 TMEM208Q9BTX3 173 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms