RNA–Protein interactions for RNA: ENST00000506896.1

SNX25-204, Transcript of sorting nexin 25, humanhuman

TSL 2

Gene SNX25, Length 518 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25-204ENST00000506896 ATP6V1G2-DDX39BF2Z307 99 aa17.24■□□□□ 0.35
SNX25-204ENST00000506896 SOX14O95416 240 aa17.24■□□□□ 0.35
SNX25-204ENST00000506896 SERPINA5P05154 406 aa17.24■□□□□ 0.35
SNX25-204ENST00000506896 CELA3BP08861 270 aa17.24■□□□□ 0.35
SNX25-204ENST00000506896 CST2P09228 141 aa17.24■□□□□ 0.35
SNX25-204ENST00000506896 PCBD1P61457 104 aa17.24■□□□□ 0.35
SNX25-204ENST00000506896 ZNF544Q6NX49 715 aa17.24■□□□□ 0.35
SNX25-204ENST00000506896 ZFP1Q6P2D0 407 aa17.24■□□□□ 0.35
SNX25-204ENST00000506896 HIPK1Q86Z02 1210 aa17.24■□□□□ 0.35
SNX25-204ENST00000506896 KRTAP1-3Q8IUG1 177 aa17.24■□□□□ 0.35
SNX25-204ENST00000506896 GLB1L2Q8IW92 636 aa17.24■□□□□ 0.35
SNX25-204ENST00000506896 LRRC18Q8N456 261 aa17.24■□□□□ 0.35
SNX25-204ENST00000506896 ATG16L2Q8NAA4 619 aa17.24■□□□□ 0.35
SNX25-204ENST00000506896 OR8D4Q8NGM9 314 aa17.24■□□□□ 0.35
SNX25-204ENST00000506896 OR4K13Q8NH42 304 aa17.24■□□□□ 0.35
SNX25-204ENST00000506896 OR5K1Q8NHB7 308 aa17.24■□□□□ 0.35
SNX25-204ENST00000506896 TEX47Q8TBZ9 253 aa17.24■□□□□ 0.35
SNX25-204ENST00000506896 HTRA1Q92743 480 aa17.24■□□□□ 0.35
SNX25-204ENST00000506896 NMNAT3Q96T66 252 aa17.24■□□□□ 0.35
SNX25-204ENST00000506896 NUAK2Q9H093 628 aa17.24■□□□□ 0.35
SNX25-204ENST00000506896 POLE4Q9NR33 117 aa17.24■□□□□ 0.35
SNX25-204ENST00000506896 PLCE1Q9P212 2302 aa17.23■□□□□ 0.35
SNX25-204ENST00000506896 C12orf71A8MTZ7 269 aa17.23■□□□□ 0.35
SNX25-204ENST00000506896 E7EQL1 145 aa17.23■□□□□ 0.35
SNX25-204ENST00000506896 MMP7P09237 267 aaPredicted RBP17.23■□□□□ 0.35
SNX25-204ENST00000506896 DANCRP0C864 163 aa17.23■□□□□ 0.35
SNX25-204ENST00000506896 PATE4P0C8F1 98 aa17.23■□□□□ 0.35
SNX25-204ENST00000506896 LAP3P28838 519 aa17.23■□□□□ 0.35
SNX25-204ENST00000506896 PLP2Q04941 152 aa17.23■□□□□ 0.35
SNX25-204ENST00000506896 KPNB1Q14974 876 aaKnown RBP17.23■□□□□ 0.35
SNX25-204ENST00000506896 ETFDHQ16134 617 aa17.23■□□□□ 0.35
SNX25-204ENST00000506896 SLC36A3Q495N2 470 aa17.23■□□□□ 0.35
SNX25-204ENST00000506896 SYT9Q86SS6 491 aa17.23■□□□□ 0.35
SNX25-204ENST00000506896 HS3ST5Q8IZT8 346 aa17.23■□□□□ 0.35
SNX25-204ENST00000506896 LRRC75A-AS1Q8N1F1 130 aa17.23■□□□□ 0.35
SNX25-204ENST00000506896 OR52E2Q8NGJ4 325 aa17.23■□□□□ 0.35
SNX25-204ENST00000506896 FGFBP3Q8TAT2 258 aa17.23■□□□□ 0.35
SNX25-204ENST00000506896 TMEM171Q8WVE6 324 aa17.23■□□□□ 0.35
SNX25-204ENST00000506896 CXorf56Q9H5V9 222 aa17.23■□□□□ 0.35
SNX25-204ENST00000506896 RERGLQ9H628 205 aa17.23■□□□□ 0.35
SNX25-204ENST00000506896 KIF17Q9P2E2 1029 aa17.23■□□□□ 0.35
SNX25-204ENST00000506896 IGHV2OR16-5A0A0B4J2B6 119 aa17.22■□□□□ 0.35
SNX25-204ENST00000506896 IQCMA0A1B0GVH7 501 aa17.22■□□□□ 0.35
SNX25-204ENST00000506896 H3BN98 237 aa17.22■□□□□ 0.35
SNX25-204ENST00000506896 TP53P04637 393 aaPredicted RBP17.22■□□□□ 0.35
SNX25-204ENST00000506896 CD99P14209 185 aa17.22■□□□□ 0.35
SNX25-204ENST00000506896 PRKACGP22612 351 aa17.22■□□□□ 0.35
SNX25-204ENST00000506896 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.22■□□□□ 0.35
SNX25-204ENST00000506896 RAB39AQ14964 217 aa17.22■□□□□ 0.35
SNX25-204ENST00000506896 PGGHGQ32M88 737 aa17.22■□□□□ 0.35
SNX25-204ENST00000506896 SLC35F1Q5T1Q4 408 aa17.22■□□□□ 0.35
SNX25-204ENST00000506896 AGAP6Q5VW22 663 aa17.22■□□□□ 0.35
SNX25-204ENST00000506896 B3GLCTQ6Y288 498 aa17.22■□□□□ 0.35
SNX25-204ENST00000506896 MYPOPQ86VE0 399 aaPredicted RBP17.22■□□□□ 0.35
SNX25-204ENST00000506896 ZDHHC13Q8IUH4 622 aa17.22■□□□□ 0.35
SNX25-204ENST00000506896 SVOPLQ8N434 492 aa17.22■□□□□ 0.35
SNX25-204ENST00000506896 NUP37Q8NFH4 326 aa17.22■□□□□ 0.35
SNX25-204ENST00000506896 MS4A3Q96HJ5 214 aa17.22■□□□□ 0.35
SNX25-204ENST00000506896 GRIP2Q9C0E4 1043 aa17.22■□□□□ 0.35
SNX25-204ENST00000506896 RACGAP1Q9H0H5 632 aa17.22■□□□□ 0.35
SNX25-204ENST00000506896 REV1Q9UBZ9 1251 aa17.22■□□□□ 0.35
SNX25-204ENST00000506896 KLHL21Q9UJP4 597 aa17.22■□□□□ 0.35
SNX25-204ENST00000506896 LAMP3Q9UQV4 416 aa17.22■□□□□ 0.35
SNX25-204ENST00000506896 SPEF1Q9Y4P9 236 aa17.22■□□□□ 0.35
SNX25-204ENST00000506896 FKBP7Q9Y680 259 aa17.22■□□□□ 0.35
SNX25-204ENST00000506896 USF3Q68DE3 2245 aa17.22■□□□□ 0.35
SNX25-204ENST00000506896 SETD2Q9BYW2 2564 aaPredicted RBP17.21■□□□□ 0.35
SNX25-204ENST00000506896 G3V2T6 193 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 IFNGP01579 166 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 IGFBP1P08833 259 aaPredicted RBP17.21■□□□□ 0.35
SNX25-204ENST00000506896 OSMP13725 252 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 ZNF32P17041 273 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 CALCRP30988 508 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 TTKP33981 857 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 FABP6P51161 128 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 LSM6P62312 80 aaKnown RBP17.21■□□□□ 0.35
SNX25-204ENST00000506896 NKX6-1P78426 367 aaPredicted RBP17.21■□□□□ 0.35
SNX25-204ENST00000506896 HSF2Q03933 536 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 GLO1Q04760 184 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 SLC27A4Q6P1M0 643 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 FAHD1Q6P587 224 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 DTX2Q86UW9 622 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 ZBTB46Q86UZ6 589 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 ZNF584Q8IVC4 421 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 OR6V1Q8N148 313 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 FBXL14Q8N1E6 418 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 NPEPL1Q8NDH3 523 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 WFDC11Q8NEX6 87 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 SDR9C7Q8NEX9 313 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 OR1J2Q8NGS2 313 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 PYDC1Q8WXC3 89 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 LRTOMTQ8WZ04 291 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 FBXO17Q96EF6 278 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 CENPNQ96H22 339 aaPredicted RBP17.21■□□□□ 0.35
SNX25-204ENST00000506896 RPRD1BQ9NQG5 326 aaKnown RBP17.21■□□□□ 0.35
SNX25-204ENST00000506896 DLL4Q9NR61 685 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 B9D1Q9UPM9 204 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 COA3Q9Y2R0 106 aaPredicted RBP17.21■□□□□ 0.35
SNX25-204ENST00000506896 TIMM10BQ9Y5J6 103 aa17.21■□□□□ 0.35
SNX25-204ENST00000506896 IGLV1-36A0A0B4J1U3 117 aa17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms