RNA–Protein interactions for RNA: ENST00000506690.1

SQSTM1-211, Transcript of sequestosome 1, humanhuman

TSL 2

Gene SQSTM1, Length 2,405 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-211ENST00000506690 S100PP25815 95 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 SMCO1Q147U7 214 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 RHOUQ7L0Q8 258 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 TMEM200AQ86VY9 491 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 JAZF1Q86VZ6 243 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 KREMEN2Q8NCW0 462 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 OR10R2Q8NGX6 335 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 ZCCHC10Q8TBK6 192 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 PHOSPHO1Q8TCT1 267 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 SMARCD2Q92925 531 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 ARL5BQ96KC2 179 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 LMF1Q96S06 567 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 RHOFQ9HBH0 211 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 SMCO4Q9NRQ5 59 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 LPAR3Q9UBY5 353 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 KLK13Q9UKR3 277 aa15.45■□□□□ 0.06
SQSTM1-211ENST00000506690 C1orf196B1AJZ1 125 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 B3GALT2O43825 422 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 FGF17O60258 216 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 CXCL14O95715 111 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 IGHV2-70P01814 119 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 CSF2RAP15509 400 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 TACR3P29371 465 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 CCKBRP32239 447 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 CAV2P51636 162 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 IL13RA1P78552 427 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 FAM53BQ14153 422 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 HYAL4Q2M3T9 481 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 WDR38Q5JTN6 314 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 ZNF550Q7Z398 422 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 NAA40Q86UY6 237 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 SLC22A8Q8TCC7 542 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 TSEN15Q8WW01 171 aaKnown RBP15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 HOXB13Q92826 284 aaPredicted RBP15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 NKX3-1Q99801 234 aaPredicted RBP15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 PRRT1Q99946 306 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 SEC61A2Q9H9S3 476 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 CHMP1AQ9HD42 196 aaPredicted RBP15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 MIOXQ9UGB7 285 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 CSAG2Q9Y5P2 127 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 ELOA3DA6NLF2 546 aaPredicted RBP15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 EIF1AYO14602 144 aaKnown RBP15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 SLC35G6P0C7Q6 338 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 CEBPBP17676 345 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 MPZP25189 248 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 SDHAP31040 664 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 EIF1AXP47813 144 aaKnown RBP15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 MEF2DQ14814 521 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 ELOA3BQ3SY89 546 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 PAPD4Q6PIY7 484 aaKnown RBP15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 SHISA5Q8N114 240 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 ELOA3Q8NG57 546 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 EDARADDQ8WWZ3 215 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 TCEAL7Q9BRU2 100 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 WDR76Q9H967 626 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 MBNL1Q9NR56 388 aaKnown RBP15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 SLC27A6Q9Y2P4 619 aa15.44■□□□□ 0.06
SQSTM1-211ENST00000506690 TBC1D3IA0A087WXS9 549 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 A0A0B4J2A0 478 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 TVP23AA6NH52 213 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 HSPB2A8KAH6 182 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 EEF1E1-BLOC1S5C9J1V9 151 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 GATCO43716 136 aaKnown RBP15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 AQP2P41181 271 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 HSPB2Q16082 182 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 RNF212Q495C1 297 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 FAHD2BQ6P2I3 314 aaPredicted RBP15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 ZDHHC22Q8N966 263 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 PLPP7Q8NBV4 271 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 FAM174AQ8TBP5 190 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 NUDCD2Q8WVJ2 157 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 DCUN1D4Q92564 292 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 CTHRC1Q96CG8 243 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 TM4SF19Q96DZ7 209 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 RRNAD1Q96FB5 475 aaKnown RBP15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 CPNE2Q96FN4 548 aaPredicted RBP15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 FAHD2AQ96GK7 314 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 TIMM29Q9BSF4 260 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 RNF126Q9BV68 326 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 SHPKQ9UHJ6 478 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 TMED7Q9Y3B3 224 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 DOCK9Q9BZ29 2069 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 MUC22E2RYF6 1773 aaPredicted RBP15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 A0A1W2PPC1 479 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 PRR19A6NJB7 356 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 DBX1A6NMT0 343 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 IGKV1D-16P01601 117 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 S100A6P06703 90 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 ACRP10323 421 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 APEHP13798 732 aaKnown RBP15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 NKPD1Q17RQ9 610 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 TCEAL5Q5H9L2 206 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 DPY19L4Q7Z388 723 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 LRRC75AQ8NAA5 344 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 OR4S1Q8NGB4 309 aa15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 SRA1Q9HD15 236 aaKnown RBP15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 METTL1Q9UBP6 276 aaKnown RBP15.43■□□□□ 0.06
SQSTM1-211ENST00000506690 CSN2P05814 226 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 SFTA3P0C7M3 94 aa15.42■□□□□ 0.06
SQSTM1-211ENST00000506690 AGAP20933 346 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms