RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 GGTLC2Q14390 218 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 MAD2L1BPQ15013 274 aaPredicted RBP4.17□□□□□ -1.74
CDH9-203ENST00000505045 RAB35Q15286 201 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 EFNB3Q15768 340 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 METTL21CQ5VZV1 264 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 SLC35D2Q76EJ3 337 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 ZNF627Q7L945 461 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 PXKQ7Z7A4 578 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 PATL1Q86TB9 770 aaKnown RBP4.17□□□□□ -1.74
CDH9-203ENST00000505045 LRP11Q86VZ4 500 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 SKA3Q8IX90 412 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 MICU2Q8IYU8 434 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 NUP37Q8NFH4 326 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 OR8J3Q8NGG0 315 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 OR6S1Q8NH40 331 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 MOSPD2Q8NHP6 518 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 TSPEARQ8WU66 669 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 ADAD1Q96M93 576 aaKnown RBP4.17□□□□□ -1.74
CDH9-203ENST00000505045 ZNF317Q96PQ6 595 aaPredicted RBP4.17□□□□□ -1.74
CDH9-203ENST00000505045 TSPAN32Q96QS1 320 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 ZNF347Q96SE7 839 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 EPYCQ99645 322 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 FOXB1Q99853 325 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 SH3GL3Q99963 347 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 VRK1Q99986 396 aaPredicted RBP4.17□□□□□ -1.74
CDH9-203ENST00000505045 SIKE1Q9BRV8 207 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 MRPL37Q9BZE1 423 aaKnown RBP4.17□□□□□ -1.74
CDH9-203ENST00000505045 BPESC1Q9GZL8 116 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 OR51B6Q9H340 312 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 TPK1Q9H3S4 243 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 MSL2Q9HCI7 577 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 NANSQ9NR45 359 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 YAE1D1Q9NRH1 226 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 CMTM6Q9NX76 183 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 RHCGQ9UBD6 479 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 A4GNTQ9UNA3 340 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 NOX1Q9Y5S8 564 aa4.17□□□□□ -1.74
CDH9-203ENST00000505045 SH3PXD2BA1X283 911 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 LRP5LA4QPB2 252 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 FAM220BPB1ANY3 271 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 hCG_2039718K7EN88 272 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 FFAR1O14842 300 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 RNF13O43567 381 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 NCR1O76036 304 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 MT-ATP6P00846 226 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 FSHBP01225 129 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 VIMP08670 466 aaKnown RBP4.16□□□□□ -1.74
CDH9-203ENST00000505045 TROVE2P10155 538 aaKnown RBP eCLIP4.16□□□□□ -1.74
CDH9-203ENST00000505045 UMPSP11172 480 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 ZNF35P13682 527 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 ZNF26P17031 533 aaPredicted RBP4.16□□□□□ -1.74
CDH9-203ENST00000505045 IGFBP5P24593 272 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 CDAP32320 146 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 AQP2P41181 271 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 NR4A2P43354 598 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 YAP1P46937 504 aaKnown RBP4.16□□□□□ -1.74
CDH9-203ENST00000505045 CSNK1A1P48729 337 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 TAS2R41P59536 307 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 VLDLRP98155 873 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 LOXL1Q08397 574 aaPredicted RBP4.16□□□□□ -1.74
CDH9-203ENST00000505045 RAB39AQ14964 217 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 TRIP10Q15642 601 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 CARTPTQ16568 116 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 GSG1Q2KHT4 349 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 C3orf36Q3SXR2 165 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 CYBRD1Q53TN4 286 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 COQ5Q5HYK3 327 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 OTPQ5XKR4 325 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 C8orf82Q6P1X6 216 aaPredicted RBP4.16□□□□□ -1.74
CDH9-203ENST00000505045 SPATA21Q7Z572 469 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 NANOGNBQ7Z5D8 188 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 TSEN54Q7Z6J9 526 aaKnown RBP4.16□□□□□ -1.74
CDH9-203ENST00000505045 IGFN1Q86VF2 1251 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 FAM86B1Q8N7N1 296 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 SYT14Q8NB59 555 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 NOXO1Q8NFA2 376 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 OR6N1Q8NGY5 312 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 OR6X1Q8NH79 312 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 BCAS4Q8TDM0 211 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 ASB10Q8WXI3 467 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 GTF3AQ92664 365 aaKnown RBP4.16□□□□□ -1.74
CDH9-203ENST00000505045 TMEM54Q969K7 222 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 FOXRED1Q96CU9 486 aaPredicted RBP4.16□□□□□ -1.74
CDH9-203ENST00000505045 TPD52L3Q96J77 140 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 FOXN4Q96NZ1 517 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 TNFRSF13CQ96RJ3 184 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 SEPHS2Q99611 448 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 DOK1Q99704 481 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 KCNS3Q9BQ31 491 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 RHNO1Q9BSD3 238 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 CCDC134Q9H6E4 229 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 ZNF442Q9H7R0 627 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 TMEM38BQ9NVV0 291 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 GLTPQ9NZD2 209 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 SELENONQ9NZV5 590 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 ZNF229Q9UJW7 825 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 UGT2A1Q9Y4X1 527 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 CAPN7Q9Y6W3 813 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 TRAV27A0A087WT01 109 aa4.16□□□□□ -1.74
CDH9-203ENST00000505045 BBIP1A8MTZ0 92 aa4.16□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms