RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 EXO5Q9H790 373 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 PNRC2Q9NPJ4 139 aaKnown RBP9.17□□□□□ -0.94
TPM3-217ENST00000504663 POLE4Q9NR33 117 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 KLHL9Q9P2J3 617 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 ST6GALNAC2Q9UJ37 374 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 MCTS1Q9ULC4 181 aaKnown RBP9.17□□□□□ -0.94
TPM3-217ENST00000504663 ERGIC3Q9Y282 383 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 GRIP1Q9Y3R0 1128 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 FAM215AQ9Y5M1 114 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 LHFPL6Q9Y693 200 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 GTF3C1Q12789 2109 aa9.17□□□□□ -0.94
TPM3-217ENST00000504663 MAP1BP46821 2468 aaKnown RBP9.16□□□□□ -0.94
TPM3-217ENST00000504663 DAPL1A0PJW8 107 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 SLC22A20A6NK97 555 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 ZNF726A6NNF4 738 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 H3BMQ9 156 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 DHHO43323 396 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 SYNGR4O95473 234 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 CRYABP02511 175 aaKnown RBP9.16□□□□□ -0.94
TPM3-217ENST00000504663 CPEP16870 476 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 ANOS1P23352 680 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 LAP3P28838 519 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 TTKP33981 857 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 RGS6P49758 472 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 GTF2A1P52655 376 aaPredicted RBP9.16□□□□□ -0.94
TPM3-217ENST00000504663 BLVRAP53004 296 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 HIST1H3AP68431 136 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 BDH1Q02338 343 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 GLO1Q04760 184 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 ENDOGQ14249 297 aaKnown RBP9.16□□□□□ -0.94
TPM3-217ENST00000504663 RNPS1Q15287 305 aaKnown RBP9.16□□□□□ -0.94
TPM3-217ENST00000504663 MED22Q15528 200 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 TP53I3Q53FA7 332 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 RIPPLY2Q5TAB7 128 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 HIST2H3PS2Q5TEC6 136 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 TSPO2Q5TGU0 170 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 GPR107Q5VW38 600 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 HIST2H3AQ71DI3 136 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 AAED1Q7RTV5 226 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 ANKRD13BQ86YJ7 626 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 CLVS1Q8IUQ0 354 aaPredicted RBP9.16□□□□□ -0.94
TPM3-217ENST00000504663 PHC2Q8IXK0 858 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 SYS1Q8N2H4 156 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 RPRMLQ8N4K4 120 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 OR5M9Q8NGP3 310 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 FNDC8Q8TC99 324 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 GATAD2BQ8WXI9 593 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 RPL3LQ92901 407 aaKnown RBP9.16□□□□□ -0.94
TPM3-217ENST00000504663 SARAFQ96BY9 339 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 INTS12Q96CB8 462 aaKnown RBP9.16□□□□□ -0.94
TPM3-217ENST00000504663 SNRNP40Q96DI7 357 aaKnown RBP9.16□□□□□ -0.94
TPM3-217ENST00000504663 MAP6Q96JE9 813 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 C4orf36Q96KX1 117 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 PGLYRP3Q96LB9 341 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 ALKBH3Q96Q83 286 aaPredicted RBP9.16□□□□□ -0.94
TPM3-217ENST00000504663 HS3ST6Q96QI5 342 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 RBP7Q96R05 134 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 DCLRE1CQ96SD1 692 aaKnown RBP9.16□□□□□ -0.94
TPM3-217ENST00000504663 MNTQ99583 582 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 NELFAQ9H3P2 528 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 RERGLQ9H628 205 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 GP6Q9HCN6 339 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 VCX3AQ9NNX9 186 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 EMC7Q9NPA0 242 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 ACOXLQ9NUZ1 547 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 NDUFB11Q9NX14 153 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 CYB5R1Q9UHQ9 305 aa9.16□□□□□ -0.94
TPM3-217ENST00000504663 MBD3L4A6NDZ8 208 aaPredicted RBP9.15□□□□□ -0.94
TPM3-217ENST00000504663 MBD3L3A6NE82 208 aaPredicted RBP9.15□□□□□ -0.94
TPM3-217ENST00000504663 MBD3L5A6NJ08 208 aaPredicted RBP9.15□□□□□ -0.94
TPM3-217ENST00000504663 ZNF670-ZNF695F2Z2N8 137 aa9.15□□□□□ -0.94
TPM3-217ENST00000504663 RPL36A-HNRNPH2H7BZ11 118 aa9.15□□□□□ -0.94
TPM3-217ENST00000504663 ZNF701M0R085 212 aaPredicted RBP9.15□□□□□ -0.94
TPM3-217ENST00000504663 ZNF593O00488 134 aaPredicted RBP9.15□□□□□ -0.94
TPM3-217ENST00000504663 GPR171O14626 319 aa9.15□□□□□ -0.94
TPM3-217ENST00000504663 AKAP8O43823 692 aaKnown RBP9.15□□□□□ -0.94
TPM3-217ENST00000504663 SLC43A1O75387 559 aa9.15□□□□□ -0.94
TPM3-217ENST00000504663 GPX5O75715 221 aa9.15□□□□□ -0.94
TPM3-217ENST00000504663 TOXO94900 526 aa9.15□□□□□ -0.94
TPM3-217ENST00000504663 YES1P07947 543 aa9.15□□□□□ -0.94
TPM3-217ENST00000504663 CD36P16671 472 aa9.15□□□□□ -0.94
TPM3-217ENST00000504663 GADD45AP24522 165 aa9.15□□□□□ -0.94
TPM3-217ENST00000504663 TGFBR1P36897 503 aa9.15□□□□□ -0.94
TPM3-217ENST00000504663 NANOS3P60323 173 aaKnown RBP9.15□□□□□ -0.94
TPM3-217ENST00000504663 ROM1Q03395 351 aa9.15□□□□□ -0.94
TPM3-217ENST00000504663 STK11Q15831 433 aa9.15□□□□□ -0.94
TPM3-217ENST00000504663 CNPY1Q3B7I2 92 aa9.15□□□□□ -0.94
TPM3-217ENST00000504663 SOWAHCQ53LP3 525 aaPredicted RBP9.15□□□□□ -0.94
TPM3-217ENST00000504663 SLC18B1Q6NT16 456 aa9.15□□□□□ -0.94
TPM3-217ENST00000504663 RPTNQ6XPR3 784 aa9.15□□□□□ -0.94
TPM3-217ENST00000504663 CFAP77Q6ZQR2 320 aa9.15□□□□□ -0.94
TPM3-217ENST00000504663 PLEKHG7Q6ZR37 379 aa9.15□□□□□ -0.94
TPM3-217ENST00000504663 VASH1Q7L8A9 365 aaPredicted RBP9.15□□□□□ -0.94
TPM3-217ENST00000504663 KLBQ86Z14 1044 aa9.15□□□□□ -0.94
TPM3-217ENST00000504663 CISD2Q8N5K1 135 aaKnown RBP9.15□□□□□ -0.94
TPM3-217ENST00000504663 ZFP41Q8N8Y5 198 aa9.15□□□□□ -0.94
TPM3-217ENST00000504663 MBD3L2Q8NHZ7 208 aaPredicted RBP9.15□□□□□ -0.94
TPM3-217ENST00000504663 ZNF420Q8TAQ5 688 aaPredicted RBP9.15□□□□□ -0.94
TPM3-217ENST00000504663 HSD17B8Q92506 261 aa9.15□□□□□ -0.94
TPM3-217ENST00000504663 C12orf43Q96C57 262 aaKnown RBP9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms