RNA–Protein interactions for RNA: ENST00000504557.1

HOXC9-202, Transcript of homeobox C9, humanhuman

TSL 3

Gene HOXC9, Length 581 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC9-202ENST00000504557 CPEB3Q8NE35 698 aaKnown RBP12.27□□□□□ -0.45
HOXC9-202ENST00000504557 FANK1Q8TC84 345 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 NMD3Q96D46 503 aaKnown RBP12.27□□□□□ -0.45
HOXC9-202ENST00000504557 PIMREGQ9BSJ6 248 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 LRMDAQ9H2I8 198 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 SMURF2Q9HAU4 748 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 ADAM21Q9UKJ8 722 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 SIGLEC7Q9Y286 467 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 IER3IP1Q9Y5U9 82 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 MALRD1Q5VYJ5 2156 aa12.27□□□□□ -0.45
HOXC9-202ENST00000504557 C5orf49A4QMS7 147 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 LYNX1G3V0Z9 82 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 M0R233 179 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 IMPA2O14732 288 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 PPP1R3DO95685 299 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 CLPTM1O96005 669 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 PTHP01270 115 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 SEMG1P04279 462 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 MMP7P09237 267 aaPredicted RBP12.26□□□□□ -0.45
HOXC9-202ENST00000504557 CSF3P09919 207 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 LYNX1P0DP58 116 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 NAT2P11245 290 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 DAOP14920 347 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 SLC25A16P16260 332 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 STOMP27105 288 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 LIMS1P48059 325 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 ZNF133P52736 654 aaPredicted RBP12.26□□□□□ -0.45
HOXC9-202ENST00000504557 SMIM11AP58511 58 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 FXNQ16595 210 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 NKPD1Q17RQ9 610 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 SPATA46Q5T0L3 261 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 DPPA2Q7Z7J5 298 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 OR1J2Q8NGS2 313 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 CCDC124Q96CT7 223 aaKnown RBP12.26□□□□□ -0.45
HOXC9-202ENST00000504557 GPA33Q99795 319 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 REV1Q9UBZ9 1251 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 TMCC3Q9ULS5 477 aa12.26□□□□□ -0.45
HOXC9-202ENST00000504557 SLC22A23A1A5C7 686 aa12.25□□□□□ -0.45
HOXC9-202ENST00000504557 SYNGR3O43761 229 aa12.25□□□□□ -0.45
HOXC9-202ENST00000504557 MGRN1O60291 552 aa12.25□□□□□ -0.45
HOXC9-202ENST00000504557 SLC16A7O60669 478 aa12.25□□□□□ -0.45
HOXC9-202ENST00000504557 PTP4A3O75365 173 aa12.25□□□□□ -0.45
HOXC9-202ENST00000504557 SCG5P05408 212 aa12.25□□□□□ -0.45
HOXC9-202ENST00000504557 MSR1P21757 451 aa12.25□□□□□ -0.45
HOXC9-202ENST00000504557 USF1P22415 310 aaPredicted RBP12.25□□□□□ -0.45
HOXC9-202ENST00000504557 GDI2P50395 445 aaKnown RBP12.25□□□□□ -0.45
HOXC9-202ENST00000504557 PSG4Q00888 419 aa12.25□□□□□ -0.45
HOXC9-202ENST00000504557 DBPQ10586 325 aaPredicted RBP12.25□□□□□ -0.45
HOXC9-202ENST00000504557 PPP1R8Q12972 351 aaKnown RBP12.25□□□□□ -0.45
HOXC9-202ENST00000504557 NRN1LQ496H8 165 aa12.25□□□□□ -0.45
HOXC9-202ENST00000504557 ZNF774Q6NX45 483 aa12.25□□□□□ -0.45
HOXC9-202ENST00000504557 UGT2A3Q6UWM9 527 aa12.25□□□□□ -0.45
HOXC9-202ENST00000504557 FAM122BQ7Z309 247 aa12.25□□□□□ -0.45
HOXC9-202ENST00000504557 OR1J1Q8NGS3 322 aa12.25□□□□□ -0.45
HOXC9-202ENST00000504557 FNDC8Q8TC99 324 aa12.25□□□□□ -0.45
HOXC9-202ENST00000504557 CLPTM1LQ96KA5 538 aa12.25□□□□□ -0.45
HOXC9-202ENST00000504557 DHRS1Q96LJ7 313 aa12.25□□□□□ -0.45
HOXC9-202ENST00000504557 ERMAPQ96PL5 475 aaPredicted RBP12.25□□□□□ -0.45
HOXC9-202ENST00000504557 ZNF416Q9BWM5 594 aa12.25□□□□□ -0.45
HOXC9-202ENST00000504557 OR2H1Q9GZK4 316 aa12.25□□□□□ -0.45
HOXC9-202ENST00000504557 SYT4Q9H2B2 425 aa12.25□□□□□ -0.45
HOXC9-202ENST00000504557 C1orf198Q9H425 327 aa12.25□□□□□ -0.45
HOXC9-202ENST00000504557 TAAR3PQ9P1P4 343 aa12.25□□□□□ -0.45
HOXC9-202ENST00000504557 PRSS37A4D1T9 235 aa12.24□□□□□ -0.45
HOXC9-202ENST00000504557 GPANK1O95872 356 aa12.24□□□□□ -0.45
HOXC9-202ENST00000504557 CST2P09228 141 aa12.24□□□□□ -0.45
HOXC9-202ENST00000504557 CTLA4P16410 223 aa12.24□□□□□ -0.45
HOXC9-202ENST00000504557 ZNF16P17020 682 aaPredicted RBP12.24□□□□□ -0.45
HOXC9-202ENST00000504557 CALB2P22676 271 aa12.24□□□□□ -0.45
HOXC9-202ENST00000504557 SDHAP31040 664 aa12.24□□□□□ -0.45
HOXC9-202ENST00000504557 RPS6KA3P51812 740 aa12.24□□□□□ -0.45
HOXC9-202ENST00000504557 UCP2P55851 309 aa12.24□□□□□ -0.45
HOXC9-202ENST00000504557 FXYD6P3P58550 94 aa12.24□□□□□ -0.45
HOXC9-202ENST00000504557 TMEM249Q2WGJ8 235 aa12.24□□□□□ -0.45
HOXC9-202ENST00000504557 FAM27BQ5VT28 67 aa12.24□□□□□ -0.45
HOXC9-202ENST00000504557 SMARCD3Q6STE5 483 aa12.24□□□□□ -0.45
HOXC9-202ENST00000504557 PTCHD4Q6ZW05 846 aa12.24□□□□□ -0.45
HOXC9-202ENST00000504557 ZER1Q7Z7L7 766 aa12.24□□□□□ -0.45
HOXC9-202ENST00000504557 DHFR2Q86XF0 187 aa12.24□□□□□ -0.45
HOXC9-202ENST00000504557 SYNPRQ8TBG9 265 aa12.24□□□□□ -0.45
HOXC9-202ENST00000504557 NEU4Q8WWR8 484 aaPredicted RBP12.24□□□□□ -0.45
HOXC9-202ENST00000504557 C11orf40Q8WZ69 217 aa12.24□□□□□ -0.45
HOXC9-202ENST00000504557 IFT27Q9BW83 186 aa12.24□□□□□ -0.45
HOXC9-202ENST00000504557 BPESC1Q9GZL8 116 aa12.24□□□□□ -0.45
HOXC9-202ENST00000504557 WNT5BQ9H1J7 359 aa12.24□□□□□ -0.45
HOXC9-202ENST00000504557 IL1RAPQ9NPH3 570 aa12.24□□□□□ -0.45
HOXC9-202ENST00000504557 POLE4Q9NR33 117 aa12.24□□□□□ -0.45
HOXC9-202ENST00000504557 COA3Q9Y2R0 106 aaPredicted RBP12.24□□□□□ -0.45
HOXC9-202ENST00000504557 POLR1DQ9Y2S0 133 aa12.24□□□□□ -0.45
HOXC9-202ENST00000504557 LOC100509620A0A075B734 347 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 A0A096LNT2 108 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 LOC390937A0A1W2PQ73 354 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 C12orf71A8MTZ7 269 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 CD5LO43866 347 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 MPZL1O95297 269 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 IGFBP1P08833 259 aaPredicted RBP12.23□□□□□ -0.45
HOXC9-202ENST00000504557 T-ENOLP0DO92 83 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 RAD52P43351 418 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 NR4A2P43354 598 aa12.23□□□□□ -0.45
HOXC9-202ENST00000504557 KLF3P57682 345 aaPredicted RBP12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms