RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 MMP21Q8N119 569 aa5.73□□□□□ -1.49
CLCN3-204ENST00000504131 OR1J1Q8NGS3 322 aa5.73□□□□□ -1.49
CLCN3-204ENST00000504131 ZNF675Q8TD23 568 aa5.73□□□□□ -1.49
CLCN3-204ENST00000504131 CST11Q9H112 138 aa5.73□□□□□ -1.49
CLCN3-204ENST00000504131 ZBP1Q9H171 429 aa5.73□□□□□ -1.49
CLCN3-204ENST00000504131 TMEM59LQ9UK28 342 aa5.73□□□□□ -1.49
CLCN3-204ENST00000504131 MEIKINA0A087WXM9 373 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 A0A1W2PRX2 142 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 SLC1A7O00341 560 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 BCAT2O15382 392 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-204ENST00000504131 PHF1O43189 567 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-204ENST00000504131 ZNF749O43361 778 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 MRPS14O60783 128 aaKnown RBP5.72□□□□□ -1.49
CLCN3-204ENST00000504131 B4GALT1P15291 398 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 COMTP21964 271 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 GRM5P41594 1212 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 OR3A4PP47883 348 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 DPYSL3Q14195 570 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 PROX2Q3B8N5 592 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 ZNF572Q7Z3I7 529 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-204ENST00000504131 LSRQ86X29 649 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-204ENST00000504131 PNLDC1Q8NA58 520 aaKnown RBP5.72□□□□□ -1.49
CLCN3-204ENST00000504131 IGDCC4Q8TDY8 1250 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 ART4Q93070 314 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 ESAMQ96AP7 390 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 CLCC1Q96S66 551 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 ACOX2Q99424 681 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 TBL1YQ9BQ87 522 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 ZNF670Q9BS34 389 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 SLC39A8Q9C0K1 460 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 BCAS3Q9H6U6 928 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 RDH14Q9HBH5 336 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 TMEM8AQ9HCN3 771 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 SLC5A6Q9Y289 635 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 PIGLQ9Y2B2 252 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 GALR2O43603 387 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-204ENST00000504131 TIMM8AO60220 97 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-204ENST00000504131 SAP30O75446 220 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 CEACAM4O75871 244 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 ATP5LO75964 103 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 ZNF205O95201 554 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 PPBPP02775 128 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 LCATP04180 440 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 C8AP07357 584 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 MGMTP16455 207 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 GYG1P46976 350 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 BTG1P62324 171 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 HES3Q5TGS1 186 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 AADACL2Q6P093 401 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 MAMDC4Q6UXC1 1216 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 TMEM151AQ8N4L1 468 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 BCORP1Q8N888 145 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 OR52E4Q8NGH9 312 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 LCORQ96JN0 433 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-204ENST00000504131 ZNF75AQ96N20 296 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 FAIM2Q9BWQ8 316 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 GREM2Q9H772 168 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 UQCR10Q9UDW1 63 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 TRAV30A0A087WSZ9 112 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 BORCS7-ASMTA0A0B4J1R7 106 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 TRAV25A0A0B4J276 109 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 G3V3Y1 287 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 NFYBP25208 207 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 PTGER3P43115 390 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 KCNQ1P51787 676 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 CLDN18P56856 261 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 SEC61A1P61619 476 aaKnown RBP5.72□□□□□ -1.49
CLCN3-204ENST00000504131 TROAPQ12815 778 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 FAM182AQ5T1J6 154 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 ZFAND6Q6FIF0 208 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 OTOP2Q7RTS6 562 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 TFB1MQ8WVM0 346 aaKnown RBP5.72□□□□□ -1.49
CLCN3-204ENST00000504131 PTH2Q96A98 100 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 GMPPAQ96IJ6 420 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-204ENST00000504131 SNX22Q96L94 193 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 SNRNP25Q9BV90 132 aaKnown RBP5.72□□□□□ -1.49
CLCN3-204ENST00000504131 SEC11CQ9BY50 192 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 RPS6KB2Q9UBS0 482 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 LGALS13Q9UHV8 139 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 ZNF346Q9UL40 294 aaKnown RBP5.72□□□□□ -1.49
CLCN3-204ENST00000504131 CYSLTR1Q9Y271 337 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 COL5A2P05997 1499 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-204ENST00000504131 A0A1W2PPM1 405 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 SOD3P08294 240 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 ARSAP15289 507 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 PNLIPRP2P54317 469 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 STARD6P59095 220 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 EMX1Q04741 257 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-204ENST00000504131 UBE2V2Q15819 145 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 WIPI1Q5MNZ9 446 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-204ENST00000504131 SLC24A5Q71RS6 500 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 ZNF571Q7Z3V5 609 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-204ENST00000504131 SLC35F2Q8IXU6 374 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 ZNF485Q8NCK3 441 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 C11orf40Q8WZ69 217 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 PAAF1Q9BRP4 392 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 SEMA6BQ9H3T3 888 aa5.72□□□□□ -1.49
CLCN3-204ENST00000504131 SEMA4BQ9NPR2 832 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-204ENST00000504131 HEYLQ9NQ87 328 aaPredicted RBP5.72□□□□□ -1.49
CLCN3-204ENST00000504131 TMEM160Q9NX00 188 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms