RNA–Protein interactions for RNA: ENST00000504078.1

USP46-205, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 4

Gene USP46, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-205ENST00000504078 LYPD2Q6UXB3 125 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 BTNL3Q6UXE8 466 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 Q6YL49 198 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 WDR88Q6ZMY6 472 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 ZNF620Q6ZNG0 422 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 THNSL2Q86YJ6 484 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 KLBQ86Z14 1044 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 FGFRL1Q8N441 504 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 PNKDQ8N490 385 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 SLC22A24Q8N4F4 322 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 KLHL36Q8N4N3 616 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 SPICQ8N5J4 248 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 KLHDC1Q8N7A1 406 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 FAM169BQ8N8A8 192 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 SYT14Q8NB59 555 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 SCCPDHQ8NBX0 429 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 RBM15BQ8NDT2 890 aaKnown RBP3.01□□□□□ -1.93
USP46-205ENST00000504078 IL17RDQ8NFM7 739 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 OR2Z1Q8NG97 314 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 OR52P1PQ8NH57 321 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 PSMA8Q8TAA3 256 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 IFT81Q8WYA0 676 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 C11orf40Q8WZ69 217 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 LHX4Q969G2 390 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 TAAR8Q969N4 342 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 UPRTQ96BW1 309 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 MOAP1Q96BY2 351 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 TUBGCP3Q96CW5 907 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 MTERF3Q96E29 417 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 BOD1Q96IK1 185 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 DHRS1Q96LJ7 313 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 OXGR1Q96P68 337 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 MOGAT1Q96PD6 335 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 ZNF317Q96PQ6 595 aaPredicted RBP3.01□□□□□ -1.93
USP46-205ENST00000504078 SIGLEC11Q96RL6 698 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 FMO2Q99518 471 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 RHOXF2Q9BQY4 288 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 NUDT16L1Q9BRJ7 211 aaKnown RBP3.01□□□□□ -1.93
USP46-205ENST00000504078 MMP28Q9H239 520 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 MMADHCQ9H3L0 296 aaPredicted RBP3.01□□□□□ -1.93
USP46-205ENST00000504078 NANOGQ9H9S0 305 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 B3GAT2Q9NPZ5 323 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 ATAD3AQ9NVI7 634 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 TMEM38BQ9NVV0 291 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 SLCO1C1Q9NYB5 712 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 TAGLN3Q9UI15 199 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 KLHL21Q9UJP4 597 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 PYCARDQ9ULZ3 195 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 CHST2Q9Y4C5 530 aa3.01□□□□□ -1.93
USP46-205ENST00000504078 WNK2Q9Y3S1 2297 aa3□□□□□ -1.93
USP46-205ENST00000504078 A0A087WUJ7 227 aa3□□□□□ -1.93
USP46-205ENST00000504078 A0A087WUV0 522 aaPredicted RBP3□□□□□ -1.93
USP46-205ENST00000504078 IGKV1D-43A0A0B4J1Z2 117 aa3□□□□□ -1.93
USP46-205ENST00000504078 A0A1B0GUS0 222 aa3□□□□□ -1.93
USP46-205ENST00000504078 A0A1B0GWA3 101 aa3□□□□□ -1.93
USP46-205ENST00000504078 C5orf49A4QMS7 147 aa3□□□□□ -1.93
USP46-205ENST00000504078 CDHR4A6H8M9 788 aa3□□□□□ -1.93
USP46-205ENST00000504078 C5orf63A6NC05 138 aa3□□□□□ -1.93
USP46-205ENST00000504078 PLXNB1O43157 2135 aa3□□□□□ -1.93
USP46-205ENST00000504078 ZSCAN12O43309 604 aa3□□□□□ -1.93
USP46-205ENST00000504078 PLIN3O60664 434 aa3□□□□□ -1.93
USP46-205ENST00000504078 NPIPB7O75200 414 aa3□□□□□ -1.93
USP46-205ENST00000504078 LYPLA1O75608 230 aaPredicted RBP3□□□□□ -1.93
USP46-205ENST00000504078 MFN2O95140 757 aa3□□□□□ -1.93
USP46-205ENST00000504078 SLC2A10O95528 541 aa3□□□□□ -1.93
USP46-205ENST00000504078 BGLAPP02818 100 aa3□□□□□ -1.93
USP46-205ENST00000504078 OPN1SWP03999 348 aa3□□□□□ -1.93
USP46-205ENST00000504078 SERPINA5P05154 406 aa3□□□□□ -1.93
USP46-205ENST00000504078 TFPTP0C1Z6 253 aa3□□□□□ -1.93
USP46-205ENST00000504078 VSIG10L2P0DP72 767 aa3□□□□□ -1.93
USP46-205ENST00000504078 IGLL1P15814 213 aa3□□□□□ -1.93
USP46-205ENST00000504078 ECHS1P30084 290 aa3□□□□□ -1.93
USP46-205ENST00000504078 HOXD3P31249 432 aaPredicted RBP3□□□□□ -1.93
USP46-205ENST00000504078 APLNRP35414 380 aa3□□□□□ -1.93
USP46-205ENST00000504078 RPL4P36578 427 aaKnown RBP3□□□□□ -1.93
USP46-205ENST00000504078 CFHR2P36980 270 aa3□□□□□ -1.93
USP46-205ENST00000504078 RPL3P39023 403 aaKnown RBP3□□□□□ -1.93
USP46-205ENST00000504078 MDH2P40926 338 aaKnown RBP3□□□□□ -1.93
USP46-205ENST00000504078 PITPNBP48739 271 aa3□□□□□ -1.93
USP46-205ENST00000504078 MMP15P51511 669 aa3□□□□□ -1.93
USP46-205ENST00000504078 UCP2P55851 309 aa3□□□□□ -1.93
USP46-205ENST00000504078 COPZ1P61923 177 aa3□□□□□ -1.93
USP46-205ENST00000504078 PPP1CBP62140 327 aa3□□□□□ -1.93
USP46-205ENST00000504078 ERVK-25P63136 954 aa3□□□□□ -1.93
USP46-205ENST00000504078 ELF3P78545 371 aaPredicted RBP3□□□□□ -1.93
USP46-205ENST00000504078 PAX2Q02962 417 aa3□□□□□ -1.93
USP46-205ENST00000504078 CAV1Q03135 178 aa3□□□□□ -1.93
USP46-205ENST00000504078 FMODQ06828 376 aa3□□□□□ -1.93
USP46-205ENST00000504078 SLC3A1Q07837 685 aa3□□□□□ -1.93
USP46-205ENST00000504078 BST1Q10588 318 aa3□□□□□ -1.93
USP46-205ENST00000504078 TOP3AQ13472 1001 aaPredicted RBP3□□□□□ -1.93
USP46-205ENST00000504078 HABP2Q14520 560 aaPredicted RBP3□□□□□ -1.93
USP46-205ENST00000504078 LARS2Q15031 903 aaKnown RBP3□□□□□ -1.93
USP46-205ENST00000504078 MAPK11Q15759 364 aa3□□□□□ -1.93
USP46-205ENST00000504078 LY6EQ16553 131 aa3□□□□□ -1.93
USP46-205ENST00000504078 TMEM95Q3KNT9 176 aa3□□□□□ -1.93
USP46-205ENST00000504078 TTMPQ5BVD1 217 aa3□□□□□ -1.93
USP46-205ENST00000504078 DEFB121Q5J5C9 76 aa3□□□□□ -1.93
USP46-205ENST00000504078 PABPC1L2AQ5JQF8 200 aa3□□□□□ -1.93
USP46-205ENST00000504078 FAM209AQ5JX71 171 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms