RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 CALRP27797 417 aaKnown RBP13.88□□□□□ -0.19
SCLT1-204ENST00000503215 LAP3P28838 519 aa13.88□□□□□ -0.19
SCLT1-204ENST00000503215 GPR4P46093 362 aa13.88□□□□□ -0.19
SCLT1-204ENST00000503215 LCN6P62502 163 aa13.88□□□□□ -0.19
SCLT1-204ENST00000503215 CCL8P80075 99 aa13.88□□□□□ -0.19
SCLT1-204ENST00000503215 PLP2Q04941 152 aa13.88□□□□□ -0.19
SCLT1-204ENST00000503215 HNRNPA0Q13151 305 aaKnown RBP13.88□□□□□ -0.19
SCLT1-204ENST00000503215 TRAM2Q15035 370 aa13.88□□□□□ -0.19
SCLT1-204ENST00000503215 SPATA46Q5T0L3 261 aa13.88□□□□□ -0.19
SCLT1-204ENST00000503215 CBLL1Q75N03 491 aa13.88□□□□□ -0.19
SCLT1-204ENST00000503215 HDDC2Q7Z4H3 204 aa13.88□□□□□ -0.19
SCLT1-204ENST00000503215 CLDND2Q8NHS1 167 aa13.88□□□□□ -0.19
SCLT1-204ENST00000503215 C11orf40Q8WZ69 217 aa13.88□□□□□ -0.19
SCLT1-204ENST00000503215 C1orf159Q96HA4 380 aa13.88□□□□□ -0.19
SCLT1-204ENST00000503215 HSH2DQ96JZ2 352 aa13.88□□□□□ -0.19
SCLT1-204ENST00000503215 POM121L2Q96KW2 1035 aa13.88□□□□□ -0.19
SCLT1-204ENST00000503215 REPIN1Q9BWE0 567 aaKnown RBP13.88□□□□□ -0.19
SCLT1-204ENST00000503215 WNT5BQ9H1J7 359 aa13.88□□□□□ -0.19
SCLT1-204ENST00000503215 SMURF2Q9HAU4 748 aa13.88□□□□□ -0.19
SCLT1-204ENST00000503215 CCNB1IP1Q9NPC3 277 aa13.88□□□□□ -0.19
SCLT1-204ENST00000503215 HINT3Q9NQE9 182 aaKnown RBP13.88□□□□□ -0.19
SCLT1-204ENST00000503215 TREM2Q9NZC2 230 aa13.88□□□□□ -0.19
SCLT1-204ENST00000503215 SLC22A23A1A5C7 686 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 C17orf100A8MU93 164 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 EFCAB9A8MZ26 197 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 FAM157AC9JC47 383 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 H0YHG0 523 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 GSTA4O15217 222 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 IGHMP01871 453 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 ACHEP22303 614 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 APLNRP35414 380 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 MPV17P39210 176 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 GPR6P46095 362 aaPredicted RBP13.87□□□□□ -0.19
SCLT1-204ENST00000503215 KLF3P57682 345 aaPredicted RBP13.87□□□□□ -0.19
SCLT1-204ENST00000503215 IFI44LQ53G44 452 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 FAM27BQ5VT28 67 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 OTPQ5XKR4 325 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 UGT2A3Q6UWM9 527 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 ZNF730Q6ZMV8 503 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 FKBP9P1Q75LS8 142 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 ARPINQ7Z6K5 226 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 OAFQ86UD1 273 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 OR1J2Q8NGS2 313 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 OR1J1Q8NGS3 322 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 GEMIN6Q8WXD5 167 aaKnown RBP13.87□□□□□ -0.19
SCLT1-204ENST00000503215 ALG12Q9BV10 488 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 C1orf198Q9H425 327 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 LPAR2Q9HBW0 351 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 ADAM18Q9Y3Q7 739 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 CACNG2Q9Y698 323 aa13.87□□□□□ -0.19
SCLT1-204ENST00000503215 C5orf49A4QMS7 147 aa13.86□□□□□ -0.19
SCLT1-204ENST00000503215 PPIHO43447 177 aaKnown RBP13.86□□□□□ -0.19
SCLT1-204ENST00000503215 FAM107AO95990 144 aa13.86□□□□□ -0.19
SCLT1-204ENST00000503215 NGFP01138 241 aa13.86□□□□□ -0.19
SCLT1-204ENST00000503215 PTHP01270 115 aa13.86□□□□□ -0.19
SCLT1-204ENST00000503215 RBMXP38159 391 aaKnown RBP13.86□□□□□ -0.19
SCLT1-204ENST00000503215 RAD52P43351 418 aa13.86□□□□□ -0.19
SCLT1-204ENST00000503215 NUDT2P50583 147 aa13.86□□□□□ -0.19
SCLT1-204ENST00000503215 ENDOGQ14249 297 aaKnown RBP13.86□□□□□ -0.19
SCLT1-204ENST00000503215 THEM4Q5T1C6 240 aa13.86□□□□□ -0.19
SCLT1-204ENST00000503215 MBOAT2Q6ZWT7 520 aa13.86□□□□□ -0.19
SCLT1-204ENST00000503215 ACOT11Q8WXI4 607 aaPredicted RBP13.86□□□□□ -0.19
SCLT1-204ENST00000503215 Q96M85 177 aa13.86□□□□□ -0.19
SCLT1-204ENST00000503215 RBP7Q96R05 134 aa13.86□□□□□ -0.19
SCLT1-204ENST00000503215 HOPXQ9BPY8 73 aaPredicted RBP13.86□□□□□ -0.19
SCLT1-204ENST00000503215 ELAC2Q9BQ52 826 aaKnown RBP13.86□□□□□ -0.19
SCLT1-204ENST00000503215 BCL2L14Q9BZR8 327 aa13.86□□□□□ -0.19
SCLT1-204ENST00000503215 OR2H1Q9GZK4 316 aa13.86□□□□□ -0.19
SCLT1-204ENST00000503215 LRMDAQ9H2I8 198 aa13.86□□□□□ -0.19
SCLT1-204ENST00000503215 EFCAB1Q9HAE3 211 aa13.86□□□□□ -0.19
SCLT1-204ENST00000503215 NMNAT1Q9HAN9 279 aaPredicted RBP13.86□□□□□ -0.19
SCLT1-204ENST00000503215 STX18Q9P2W9 335 aaKnown RBP13.86□□□□□ -0.19
SCLT1-204ENST00000503215 TMEFF2Q9UIK5 374 aaPredicted RBP13.86□□□□□ -0.19
SCLT1-204ENST00000503215 AP3M1Q9Y2T2 418 aa13.86□□□□□ -0.19
SCLT1-204ENST00000503215 IMPA2O14732 288 aa13.85□□□□□ -0.19
SCLT1-204ENST00000503215 CCDC22O60826 627 aa13.85□□□□□ -0.19
SCLT1-204ENST00000503215 IFNA8P32881 189 aa13.85□□□□□ -0.19
SCLT1-204ENST00000503215 TMEM33P57088 247 aa13.85□□□□□ -0.19
SCLT1-204ENST00000503215 SELENOVP59797 346 aa13.85□□□□□ -0.19
SCLT1-204ENST00000503215 LMO4P61968 165 aa13.85□□□□□ -0.19
SCLT1-204ENST00000503215 TAF11Q15544 211 aa13.85□□□□□ -0.19
SCLT1-204ENST00000503215 TSTQ16762 297 aaKnown RBP13.85□□□□□ -0.19
SCLT1-204ENST00000503215 SPRNQ5BIV9 151 aa13.85□□□□□ -0.19
SCLT1-204ENST00000503215 AVPI1Q5T686 147 aa13.85□□□□□ -0.19
SCLT1-204ENST00000503215 ZNF774Q6NX45 483 aa13.85□□□□□ -0.19
SCLT1-204ENST00000503215 FOXL2NBQ6ZUU3 175 aa13.85□□□□□ -0.19
SCLT1-204ENST00000503215 RFPL4BQ6ZWI9 263 aa13.85□□□□□ -0.19
SCLT1-204ENST00000503215 FAM86B1Q8N7N1 296 aa13.85□□□□□ -0.19
SCLT1-204ENST00000503215 MARS2Q96GW9 593 aaKnown RBP13.85□□□□□ -0.19
SCLT1-204ENST00000503215 ZNF416Q9BWM5 594 aa13.85□□□□□ -0.19
SCLT1-204ENST00000503215 MYLK2Q9H1R3 596 aa13.85□□□□□ -0.19
SCLT1-204ENST00000503215 KCNN2Q9H2S1 579 aa13.85□□□□□ -0.19
SCLT1-204ENST00000503215 EMC7Q9NPA0 242 aa13.85□□□□□ -0.19
SCLT1-204ENST00000503215 EGFL7Q9UHF1 273 aa13.85□□□□□ -0.19
SCLT1-204ENST00000503215 ENPP4Q9Y6X5 453 aa13.85□□□□□ -0.19
SCLT1-204ENST00000503215 A0A1W2PPL8 197 aa13.84□□□□□ -0.19
SCLT1-204ENST00000503215 HTR3EA5X5Y0 456 aa13.84□□□□□ -0.19
SCLT1-204ENST00000503215 IGHV3-13P01766 116 aa13.84□□□□□ -0.19
SCLT1-204ENST00000503215 CST2P09228 141 aa13.84□□□□□ -0.19
SCLT1-204ENST00000503215 HNF1AP20823 631 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms