RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 PCGF3Q3KNV8 242 aa14.88□□□□□ -0.03
VCAN-204ENST00000502527 C2orf76Q3KRA6 126 aa14.88□□□□□ -0.03
VCAN-204ENST00000502527 TMEM225Q6GV28 225 aa14.88□□□□□ -0.03
VCAN-204ENST00000502527 FAAP20Q6NZ36 180 aa14.88□□□□□ -0.03
VCAN-204ENST00000502527 TMEM71Q6P5X7 295 aa14.88□□□□□ -0.03
VCAN-204ENST00000502527 SPICQ8N5J4 248 aa14.88□□□□□ -0.03
VCAN-204ENST00000502527 NFAM1Q8NET5 270 aaPredicted RBP14.88□□□□□ -0.03
VCAN-204ENST00000502527 NUBPLQ8TB37 319 aa14.88□□□□□ -0.03
VCAN-204ENST00000502527 ASB5Q8WWX0 329 aa14.88□□□□□ -0.03
VCAN-204ENST00000502527 PPP1R14AQ96A00 147 aa14.88□□□□□ -0.03
VCAN-204ENST00000502527 WNT16Q9UBV4 365 aa14.88□□□□□ -0.03
VCAN-204ENST00000502527 NPIPA1Q9UND3 350 aa14.88□□□□□ -0.03
VCAN-204ENST00000502527 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.87□□□□□ -0.03
VCAN-204ENST00000502527 SNRPGP15A8MWD9 76 aa14.87□□□□□ -0.03
VCAN-204ENST00000502527 CREBL2O60519 120 aaPredicted RBP14.87□□□□□ -0.03
VCAN-204ENST00000502527 NOS1APO75052 506 aaPredicted RBP14.87□□□□□ -0.03
VCAN-204ENST00000502527 FBXO45P0C2W1 286 aa14.87□□□□□ -0.03
VCAN-204ENST00000502527 ARRB1P49407 418 aaPredicted RBP14.87□□□□□ -0.03
VCAN-204ENST00000502527 ACY1Q03154 408 aa14.87□□□□□ -0.03
VCAN-204ENST00000502527 TOMM20Q15388 145 aa14.87□□□□□ -0.03
VCAN-204ENST00000502527 GLT8D1Q68CQ7 371 aa14.87□□□□□ -0.03
VCAN-204ENST00000502527 LYPD8Q6UX82 237 aa14.87□□□□□ -0.03
VCAN-204ENST00000502527 H1FNTQ75WM6 255 aaPredicted RBP14.87□□□□□ -0.03
VCAN-204ENST00000502527 KDM8Q8N371 416 aa14.87□□□□□ -0.03
VCAN-204ENST00000502527 MEIOBQ8N635 442 aa14.87□□□□□ -0.03
VCAN-204ENST00000502527 ASB10Q8WXI3 467 aa14.87□□□□□ -0.03
VCAN-204ENST00000502527 SEC22CQ9BRL7 303 aa14.87□□□□□ -0.03
VCAN-204ENST00000502527 DUSP15Q9H1R2 295 aaPredicted RBP14.87□□□□□ -0.03
VCAN-204ENST00000502527 R4GMQ9 66 aa14.87□□□□□ -0.03
VCAN-204ENST00000502527 ABCA7Q8IZY2 2146 aa14.87□□□□□ -0.03
VCAN-204ENST00000502527 C2orf72A6NCS6 295 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 NPIPB13A6NJU9 1138 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 NPIPB4C9JG80 1138 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 MPZL1O95297 269 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 IL11P20809 199 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 PTGS2P35354 604 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 OR7A5Q15622 319 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 LGALSLQ3ZCW2 172 aaPredicted RBP14.86□□□□□ -0.03
VCAN-204ENST00000502527 NKAIN1Q4KMZ8 207 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 FAM166AQ6J272 317 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 ZNF680Q8NEM1 530 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 SLC26A10Q8NG04 563 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 THAP3Q8WTV1 239 aaPredicted RBP14.86□□□□□ -0.03
VCAN-204ENST00000502527 DDIT4LQ96D03 193 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 SORCS2Q96PQ0 1159 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 EIF3KQ9UBQ5 218 aaKnown RBP14.86□□□□□ -0.03
VCAN-204ENST00000502527 ZNF69Q9UC07 566 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 PCDHGA5Q9Y5G8 931 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 TRAV18A0A075B6X5 111 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 CIB4A0PJX0 185 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 ZNF208O43345 1280 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 ALOX12BO75342 701 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 FSTP19883 344 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 ANXA7P20073 488 aaKnown RBP14.86□□□□□ -0.03
VCAN-204ENST00000502527 ZNF81P51508 661 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 DLX5P56178 289 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 RBMS2Q15434 407 aaKnown RBP14.86□□□□□ -0.03
VCAN-204ENST00000502527 ASPHD2Q6ICH7 369 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 MDGA2Q7Z553 956 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 ARL5BQ96KC2 179 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 CITED4Q96RK1 184 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 SLX1AQ9BQ83 275 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 HEXA-AS1Q9H8Q6 139 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 MGAT4CQ9UBM8 478 aa14.86□□□□□ -0.03
VCAN-204ENST00000502527 PPIEQ9UNP9 301 aaKnown RBP14.86□□□□□ -0.03
VCAN-204ENST00000502527 RP1P56715 2156 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 ZNF354AO60765 605 aaPredicted RBP14.85□□□□□ -0.03
VCAN-204ENST00000502527 SRSF10O75494 262 aaKnown RBP14.85□□□□□ -0.03
VCAN-204ENST00000502527 SLC22A5O76082 557 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 WNT11O96014 354 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 NAGAP17050 411 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 PRSS3P35030 304 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 ZNF626Q68DY1 528 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 OR1J4Q8NGS1 313 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 TTC9Q92623 222 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 CLEC4MQ9H2X3 399 aaPredicted RBP14.85□□□□□ -0.03
VCAN-204ENST00000502527 CHST11Q9NPF2 352 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 MED11Q9P086 117 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 ATXN7L1Q9ULK2 861 aaPredicted RBP14.85□□□□□ -0.03
VCAN-204ENST00000502527 HHLA2Q9UM44 414 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 TMEM272A0A1B0GTI8 110 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 MEGF11A6BM72 1044 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 IGFBP3P17936 291 aaPredicted RBP14.85□□□□□ -0.03
VCAN-204ENST00000502527 OR3A3P47888 321 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 TLE3Q04726 772 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 SSBP1Q04837 148 aaKnown RBP14.85□□□□□ -0.03
VCAN-204ENST00000502527 SHBQ15464 509 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 PCK2Q16822 640 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 ARSKQ6UWY0 536 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 ZNF574Q6ZN55 896 aaPredicted RBP14.85□□□□□ -0.03
VCAN-204ENST00000502527 PLPP7Q8NBV4 271 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 SLC38A9Q8NBW4 561 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 OR5L2Q8NGL0 311 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 OR4C16Q8NGL9 310 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 PMEPA1Q969W9 287 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 SLC25A28Q96A46 364 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 KCNK17Q96T54 332 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 NPAS1Q99742 590 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 ATG5Q9H1Y0 275 aa14.85□□□□□ -0.03
VCAN-204ENST00000502527 PRMT8Q9NR22 394 aaPredicted RBP14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms