RNA–Protein interactions for RNA: ENST00000498540.2

TRAF4-212, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 748 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-212ENST00000498540 IGHV3OR16-10A0A075B7F0 116 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 IGKV1D-43A0A0B4J1Z2 117 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 TMEM120BA0PK00 339 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 MCIDASD6RGH6 385 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 BLOC1S5-TXNDC5H3BN57 136 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 CLDN34H7C241 214 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 TRMUO75648 421 aaKnown RBP12.38□□□□□ -0.43
TRAF4-212ENST00000498540 HIST1H2ABP04908 130 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 CD55P08174 381 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 GPX2P18283 190 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 OMGP23515 440 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 SLC6A9P48067 706 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 ZNF133P52736 654 aaPredicted RBP12.38□□□□□ -0.43
TRAF4-212ENST00000498540 PCBP3P57721 371 aaKnown RBP12.38□□□□□ -0.43
TRAF4-212ENST00000498540 MRPS34P82930 218 aaKnown RBP12.38□□□□□ -0.43
TRAF4-212ENST00000498540 RPL18Q07020 188 aaKnown RBP12.38□□□□□ -0.43
TRAF4-212ENST00000498540 WDR93Q6P2C0 686 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 BLOC1S3Q6QNY0 202 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 HIST3H2AQ7L7L0 130 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 JAZF1Q86VZ6 243 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 ABHD4Q8TB40 342 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 HIST1H2ACQ93077 130 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 SPDL1Q96EA4 605 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 ZNF426Q9BUY5 554 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 MRI1Q9BV20 369 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 MS4A7Q9GZW8 240 aaPredicted RBP12.38□□□□□ -0.43
TRAF4-212ENST00000498540 SIAEQ9HAT2 523 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 PATZ1Q9HBE1 687 aaKnown RBP12.38□□□□□ -0.43
TRAF4-212ENST00000498540 CYSLTR2Q9NS75 346 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 TMEM106BQ9NUM4 274 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 EIF3KQ9UBQ5 218 aaKnown RBP12.38□□□□□ -0.43
TRAF4-212ENST00000498540 KLHL21Q9UJP4 597 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 ZDHHC8Q9ULC8 765 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 ANGPT4Q9Y264 503 aa12.38□□□□□ -0.43
TRAF4-212ENST00000498540 A0A1W2PRG6 482 aa12.37□□□□□ -0.43
TRAF4-212ENST00000498540 A8MXK9 166 aa12.37□□□□□ -0.43
TRAF4-212ENST00000498540 NGFP01138 241 aa12.37□□□□□ -0.43
TRAF4-212ENST00000498540 IGHV4-38-2P0DP08 117 aa12.37□□□□□ -0.43
TRAF4-212ENST00000498540 ACADSP16219 412 aa12.37□□□□□ -0.43
TRAF4-212ENST00000498540 MRPL19P49406 292 aaKnown RBP12.37□□□□□ -0.43
TRAF4-212ENST00000498540 GDI2P50395 445 aaKnown RBP12.37□□□□□ -0.43
TRAF4-212ENST00000498540 UGT2B15P54855 530 aa12.37□□□□□ -0.43
TRAF4-212ENST00000498540 STX1BP61266 288 aa12.37□□□□□ -0.43
TRAF4-212ENST00000498540 PPP1CBP62140 327 aa12.37□□□□□ -0.43
TRAF4-212ENST00000498540 ERVK-25P63136 954 aa12.37□□□□□ -0.43
TRAF4-212ENST00000498540 TNFAIP6P98066 277 aaPredicted RBP12.37□□□□□ -0.43
TRAF4-212ENST00000498540 PSG4Q00888 419 aa12.37□□□□□ -0.43
TRAF4-212ENST00000498540 FMODQ06828 376 aa12.37□□□□□ -0.43
TRAF4-212ENST00000498540 SRSF4Q08170 494 aaKnown RBP12.37□□□□□ -0.43
TRAF4-212ENST00000498540 ZMYND11Q15326 602 aa12.37□□□□□ -0.43
TRAF4-212ENST00000498540 PTOV1Q86YD1 416 aa12.37□□□□□ -0.43
TRAF4-212ENST00000498540 KLHL36Q8N4N3 616 aa12.37□□□□□ -0.43
TRAF4-212ENST00000498540 SPICQ8N5J4 248 aa12.37□□□□□ -0.43
TRAF4-212ENST00000498540 VANGL1Q8TAA9 524 aaPredicted RBP12.37□□□□□ -0.43
TRAF4-212ENST00000498540 CPPED1Q9BRF8 314 aaPredicted RBP12.37□□□□□ -0.43
TRAF4-212ENST00000498540 KCNN2Q9H2S1 579 aa12.37□□□□□ -0.43
TRAF4-212ENST00000498540 MEPEQ9NQ76 525 aaPredicted RBP12.37□□□□□ -0.43
TRAF4-212ENST00000498540 CCDC167Q9P0B6 97 aa12.37□□□□□ -0.43
TRAF4-212ENST00000498540 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.37□□□□□ -0.43
TRAF4-212ENST00000498540 CGGBP1Q9UFW8 167 aaPredicted RBP12.37□□□□□ -0.43
TRAF4-212ENST00000498540 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.37□□□□□ -0.43
TRAF4-212ENST00000498540 V9GYY5 206 aaPredicted RBP12.37□□□□□ -0.43
TRAF4-212ENST00000498540 MDFIC2A0A1B0GVS7 189 aa12.36□□□□□ -0.43
TRAF4-212ENST00000498540 TRAPPC13A5PLN9 417 aa12.36□□□□□ -0.43
TRAF4-212ENST00000498540 CENPBD1B2RD01 187 aa12.36□□□□□ -0.43
TRAF4-212ENST00000498540 F5H0A9 414 aaPredicted RBP12.36□□□□□ -0.43
TRAF4-212ENST00000498540 GPANK1O95872 356 aa12.36□□□□□ -0.43
TRAF4-212ENST00000498540 LIPAP38571 399 aa12.36□□□□□ -0.43
TRAF4-212ENST00000498540 SGCAQ16586 387 aa12.36□□□□□ -0.43
TRAF4-212ENST00000498540 TMEM155Q4W5P6 130 aa12.36□□□□□ -0.43
TRAF4-212ENST00000498540 ZMAT1Q5H9K5 638 aa12.36□□□□□ -0.43
TRAF4-212ENST00000498540 EPGNQ6UW88 154 aa12.36□□□□□ -0.43
TRAF4-212ENST00000498540 SPATC1Q76KD6 591 aa12.36□□□□□ -0.43
TRAF4-212ENST00000498540 PARP8Q8N3A8 854 aa12.36□□□□□ -0.43
TRAF4-212ENST00000498540 ZNF283Q8N7M2 679 aa12.36□□□□□ -0.43
TRAF4-212ENST00000498540 NSMAFQ92636 917 aa12.36□□□□□ -0.43
TRAF4-212ENST00000498540 TMIGD2Q96BF3 282 aa12.36□□□□□ -0.43
TRAF4-212ENST00000498540 NMD3Q96D46 503 aaKnown RBP12.36□□□□□ -0.43
TRAF4-212ENST00000498540 SIGLEC11Q96RL6 698 aa12.36□□□□□ -0.43
TRAF4-212ENST00000498540 DIRC2Q96SL1 478 aa12.36□□□□□ -0.43
TRAF4-212ENST00000498540 PRSS27Q9BQR3 290 aa12.36□□□□□ -0.43
TRAF4-212ENST00000498540 SLC19A3Q9BZV2 496 aa12.36□□□□□ -0.43
TRAF4-212ENST00000498540 WNT5BQ9H1J7 359 aa12.36□□□□□ -0.43
TRAF4-212ENST00000498540 CORO2BQ9UQ03 480 aa12.36□□□□□ -0.43
TRAF4-212ENST00000498540 USH1CQ9Y6N9 552 aa12.36□□□□□ -0.43
TRAF4-212ENST00000498540 WNK1Q9H4A3 2382 aa12.36□□□□□ -0.43
TRAF4-212ENST00000498540 EVPLLA8MZ36 301 aa12.35□□□□□ -0.43
TRAF4-212ENST00000498540 H3BSA7 217 aa12.35□□□□□ -0.43
TRAF4-212ENST00000498540 M0QX08 132 aa12.35□□□□□ -0.43
TRAF4-212ENST00000498540 TIMM8AO60220 97 aaPredicted RBP12.35□□□□□ -0.43
TRAF4-212ENST00000498540 ICMTO60725 284 aa12.35□□□□□ -0.43
TRAF4-212ENST00000498540 CD80P33681 288 aa12.35□□□□□ -0.43
TRAF4-212ENST00000498540 PCGF2P35227 344 aa12.35□□□□□ -0.43
TRAF4-212ENST00000498540 AQP2P41181 271 aa12.35□□□□□ -0.43
TRAF4-212ENST00000498540 DAP3P51398 398 aaKnown RBP12.35□□□□□ -0.43
TRAF4-212ENST00000498540 BTG1P62324 171 aa12.35□□□□□ -0.43
TRAF4-212ENST00000498540 PAX8Q06710 450 aa12.35□□□□□ -0.43
TRAF4-212ENST00000498540 PSG7Q13046 419 aa12.35□□□□□ -0.43
TRAF4-212ENST00000498540 CDK5R2Q13319 367 aa12.35□□□□□ -0.43
TRAF4-212ENST00000498540 MTX3Q5HYI7 312 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms