RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 KRT71Q3SY84 523 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 ZNF362Q5T0B9 420 aaPredicted RBP11.72□□□□□ -0.53
CCDC58-207ENST00000498466 ZNF613Q6PF04 617 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 TTC33Q6PID6 262 aaPredicted RBP11.72□□□□□ -0.53
CCDC58-207ENST00000498466 BTNL3Q6UXE8 466 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 LINC00114Q6XXX2 140 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 RFPL4BQ6ZWI9 263 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 LRRC28Q86X40 367 aaPredicted RBP11.72□□□□□ -0.53
CCDC58-207ENST00000498466 ARMC8Q8IUR7 673 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 C1orf174Q8IYL3 243 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 NOXO1Q8NFA2 376 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 OR4F5Q8NH21 305 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 AKR7LQ8NHP1 331 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 ARHGDIGQ99819 225 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 NANOGQ9H9S0 305 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 SIAEQ9HAT2 523 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 SSU72Q9NP77 194 aaKnown RBP11.72□□□□□ -0.53
CCDC58-207ENST00000498466 KCNK9Q9NPC2 374 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 SLCO1B3Q9NPD5 702 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 TNFRSF19Q9NS68 423 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 KLHL21Q9UJP4 597 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 ZNF229Q9UJW7 825 aa11.72□□□□□ -0.53
CCDC58-207ENST00000498466 TRAV40A0A0B4J280 105 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 A0A1W2PRG6 482 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 CPSF4LA6NMK7 179 aaKnown RBP11.71□□□□□ -0.53
CCDC58-207ENST00000498466 F5H0A9 414 aaPredicted RBP11.71□□□□□ -0.53
CCDC58-207ENST00000498466 BLOC1S5-TXNDC5H3BN57 136 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 M0R3H8 397 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 UBDO15205 165 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 TGDSO95455 350 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 TNFRSF1AP19438 455 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 TNFSF4P23510 183 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 SLC6A2P23975 617 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 CDAP32320 146 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 SCARB2Q14108 478 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 ZMYND11Q15326 602 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 MTX3Q5HYI7 312 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 OLFML2AQ68BL7 652 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 NANOGNBQ7Z5D8 188 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 C10orf111Q8N326 155 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 ZNF283Q8N7M2 679 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 SMYD1Q8NB12 490 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 UBE2FQ969M7 185 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 ZDHHC16Q969W1 377 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 CITED1Q99966 193 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 MRPL13Q9BYD1 178 aaKnown RBP11.71□□□□□ -0.53
CCDC58-207ENST00000498466 EVA1AQ9H8M9 152 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 SLC25A37Q9NYZ2 338 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 IL20RAQ9UHF4 553 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 ZNF281Q9Y2X9 895 aa11.71□□□□□ -0.53
CCDC58-207ENST00000498466 H3BSA7 217 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 TIMM23O14925 209 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 FMO6PO60774 539 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 TRMUO75648 421 aaKnown RBP11.7□□□□□ -0.54
CCDC58-207ENST00000498466 SLC2A10O95528 541 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 PLATP00750 562 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 NGFP01138 241 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 F13BP05160 661 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 ASAH2BP0C7U1 165 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 PPIAL4GP0DN37 164 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 HOXB9P17482 250 aaPredicted RBP11.7□□□□□ -0.54
CCDC58-207ENST00000498466 MDH2P40926 338 aaKnown RBP11.7□□□□□ -0.54
CCDC58-207ENST00000498466 ARHGDIAP52565 204 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 VSNL1P62760 191 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 ERVK-25P63136 954 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 MRPS34P82930 218 aaKnown RBP11.7□□□□□ -0.54
CCDC58-207ENST00000498466 PSG4Q00888 419 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 CDK5R2Q13319 367 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 MPP2Q14168 576 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 TAF11Q15544 211 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 SGCAQ16586 387 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 ENTPD8Q5MY95 495 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 C10orf128Q5T292 105 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 HIST2H2BDQ6DRA6 164 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 FIP1L1Q6UN15 594 aaKnown RBP11.7□□□□□ -0.54
CCDC58-207ENST00000498466 LRRN1Q6UXK5 716 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 ZER1Q7Z7L7 766 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 OR2Z1Q8NG97 314 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 UPRTQ96BW1 309 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 MAELQ96JY0 434 aaKnown RBP11.7□□□□□ -0.54
CCDC58-207ENST00000498466 SAMD8Q96LT4 415 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 TMEM109Q9BVC6 243 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 SSBP3Q9BWW4 388 aaPredicted RBP11.7□□□□□ -0.54
CCDC58-207ENST00000498466 THAP1Q9NVV9 213 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 PPP1R3CQ9UQK1 317 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 LRCH1Q9Y2L9 728 aa11.7□□□□□ -0.54
CCDC58-207ENST00000498466 TANC2Q9HCD6 1990 aa11.69□□□□□ -0.54
CCDC58-207ENST00000498466 CEACAM18A8MTB9 384 aa11.69□□□□□ -0.54
CCDC58-207ENST00000498466 CENPBD1B2RD01 187 aa11.69□□□□□ -0.54
CCDC58-207ENST00000498466 SRRM5B3KS81 715 aa11.69□□□□□ -0.54
CCDC58-207ENST00000498466 ACADSP16219 412 aa11.69□□□□□ -0.54
CCDC58-207ENST00000498466 PPIBP23284 216 aaKnown RBP11.69□□□□□ -0.54
CCDC58-207ENST00000498466 DAP3P51398 398 aaKnown RBP11.69□□□□□ -0.54
CCDC58-207ENST00000498466 PSG7Q13046 419 aa11.69□□□□□ -0.54
CCDC58-207ENST00000498466 DEFB112Q30KQ8 113 aa11.69□□□□□ -0.54
CCDC58-207ENST00000498466 BRD3OSQ6XYD6 125 aa11.69□□□□□ -0.54
CCDC58-207ENST00000498466 HDDC2Q7Z4H3 204 aa11.69□□□□□ -0.54
CCDC58-207ENST00000498466 C1QL4Q86Z23 238 aa11.69□□□□□ -0.54
CCDC58-207ENST00000498466 MSRB3Q8IXL7 192 aa11.69□□□□□ -0.54
CCDC58-207ENST00000498466 ALDH16A1Q8IZ83 802 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms