RNA–Protein interactions for RNA: ENST00000498339.1

CDK9-205, Transcript of cyclin dependent kinase 9, humanhuman

TSL 2

Gene CDK9, Length 458 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-205ENST00000498339 PPP1R3CQ9UQK1 317 aa9.79□□□□□ -0.84
CDK9-205ENST00000498339 KPNA4O00629 521 aaPredicted RBP9.78□□□□□ -0.84
CDK9-205ENST00000498339 CH25HO95992 272 aa9.78□□□□□ -0.84
CDK9-205ENST00000498339 HIST1H2ABP04908 130 aa9.78□□□□□ -0.84
CDK9-205ENST00000498339 ADH4P08319 380 aa9.78□□□□□ -0.84
CDK9-205ENST00000498339 MMP7P09237 267 aaPredicted RBP9.78□□□□□ -0.84
CDK9-205ENST00000498339 ZCCHC18P0CG32 403 aa9.78□□□□□ -0.84
CDK9-205ENST00000498339 ZNF32P17041 273 aa9.78□□□□□ -0.84
CDK9-205ENST00000498339 CDH12P55289 794 aa9.78□□□□□ -0.84
CDK9-205ENST00000498339 KRTAP10-3P60369 221 aa9.78□□□□□ -0.84
CDK9-205ENST00000498339 RGNQ15493 299 aa9.78□□□□□ -0.84
CDK9-205ENST00000498339 C2orf68Q2NKX9 166 aa9.78□□□□□ -0.84
CDK9-205ENST00000498339 NRN1LQ496H8 165 aa9.78□□□□□ -0.84
CDK9-205ENST00000498339 RUSC1-AS1Q66K80 236 aa9.78□□□□□ -0.84
CDK9-205ENST00000498339 NXNQ6DKJ4 435 aa9.78□□□□□ -0.84
CDK9-205ENST00000498339 HIST3H2AQ7L7L0 130 aa9.78□□□□□ -0.84
CDK9-205ENST00000498339 ZER1Q7Z7L7 766 aa9.78□□□□□ -0.84
CDK9-205ENST00000498339 BHLHE22Q8NFJ8 381 aaPredicted RBP9.78□□□□□ -0.84
CDK9-205ENST00000498339 HIST1H2ACQ93077 130 aa9.78□□□□□ -0.84
CDK9-205ENST00000498339 PLEKHA8Q96JA3 519 aa9.78□□□□□ -0.84
CDK9-205ENST00000498339 TMEM43Q9BTV4 400 aa9.78□□□□□ -0.84
CDK9-205ENST00000498339 C20orf27Q9GZN8 174 aa9.78□□□□□ -0.84
CDK9-205ENST00000498339 NANSQ9NR45 359 aa9.78□□□□□ -0.84
CDK9-205ENST00000498339 KIF17Q9P2E2 1029 aa9.78□□□□□ -0.84
CDK9-205ENST00000498339 H3BSA7 217 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 TPST1O60507 370 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 SLC22A3O75751 556 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 ZNF205O95201 554 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 PRB2P02812 416 aaPredicted RBP9.77□□□□□ -0.85
CDK9-205ENST00000498339 CSF1P09603 554 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 ETS2P15036 469 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 CDAP32320 146 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 ETV4P43268 484 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 ERVK-25P63136 954 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 SGCAQ16586 387 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 GCNT6Q5T4J0 391 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 DHRS4L2Q6PKH6 230 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 Q6YL49 198 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 ZNF620Q6ZNG0 422 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 NANOGNBQ7Z5D8 188 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 KLBQ86Z14 1044 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 C1orf174Q8IYL3 243 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 POU5F2Q8N7G0 328 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 ITLN1Q8WWA0 313 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 RAB40AQ8WXH6 277 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 POM121L2Q96KW2 1035 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 SAMD8Q96LT4 415 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 SORT1Q99523 831 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 NOX4Q9NPH5 578 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.77□□□□□ -0.85
CDK9-205ENST00000498339 PNPOQ9NVS9 261 aa9.77□□□□□ -0.85
CDK9-205ENST00000498339 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.77□□□□□ -0.85
CDK9-205ENST00000498339 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.77□□□□□ -0.85
CDK9-205ENST00000498339 LOC100509620A0A075B734 347 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 A0A1W2PRG6 482 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 PRORSD1PA6NEY8 169 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 G3V4G9 280 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 CLIC1O00299 241 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 SDHDO14521 159 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 SURF4O15260 269 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 SLC2A10O95528 541 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 ABHD16AO95870 558 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 MELTFP08582 738 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 THRBP10828 461 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 IDO1P14902 403 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 GSTM3P21266 225 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 BGNP21810 368 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 EPHA3P29320 983 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 AQP1P29972 269 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 PCBP3P57721 371 aaKnown RBP9.76□□□□□ -0.85
CDK9-205ENST00000498339 FGF12P61328 243 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 CD47Q08722 323 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 FADDQ13158 208 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 FAM189A2Q15884 450 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 ZNF74Q16587 644 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 SWT1Q5T5J6 900 aaKnown RBP9.76□□□□□ -0.85
CDK9-205ENST00000498339 REEP3Q6NUK4 255 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 TTC33Q6PID6 262 aaPredicted RBP9.76□□□□□ -0.85
CDK9-205ENST00000498339 ARL9Q6T311 187 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 NLRC3Q7RTR2 1065 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 HDDC2Q7Z4H3 204 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 TMEM86BQ8N661 226 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 OR8B3Q8NGG8 313 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 NSMAFQ92636 917 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 FAM71F1Q96KD3 344 aaPredicted RBP9.76□□□□□ -0.85
CDK9-205ENST00000498339 OR2V2Q96R30 315 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 OR8B2Q96RD0 313 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 SIGLEC11Q96RL6 698 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 NUDT16L1Q9BRJ7 211 aaKnown RBP9.76□□□□□ -0.85
CDK9-205ENST00000498339 PCGF1Q9BSM1 259 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 WDR55Q9H6Y2 383 aaPredicted RBP9.76□□□□□ -0.85
CDK9-205ENST00000498339 SIAEQ9HAT2 523 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 ELOVL3Q9HB03 270 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 TAS2R5Q9NYW4 299 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 LGALS13Q9UHV8 139 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 ANGPT4Q9Y264 503 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 POMT1Q9Y6A1 747 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 PLXNB1O43157 2135 aa9.76□□□□□ -0.85
CDK9-205ENST00000498339 CPSF4LA6NMK7 179 aaKnown RBP9.75□□□□□ -0.85
CDK9-205ENST00000498339 BLOC1S5-TXNDC5H3BN57 136 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms