RNA–Protein interactions for RNA: ENST00000498205.5

SSR3-209, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 593 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-209ENST00000498205 ELAVL4P26378 380 aaKnown RBP4.03□□□□□ -1.76
SSR3-209ENST00000498205 IFNA8P32881 189 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 MC5RP33032 325 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 CASP3P42574 277 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 CRATP43155 626 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 NKX2-1P43699 371 aaPredicted RBP4.03□□□□□ -1.76
SSR3-209ENST00000498205 IDH2P48735 452 aaKnown RBP4.03□□□□□ -1.76
SSR3-209ENST00000498205 SMSP52788 366 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 CRISP3P54108 245 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 RAG2P55895 527 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 CLDN15P56746 228 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 PSPHP78330 225 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 DLK1P80370 383 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 CDK5Q00535 292 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 REEP5Q00765 189 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 C2orf80Q0P641 193 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 ELAVL3Q14576 367 aaKnown RBP4.03□□□□□ -1.76
SSR3-209ENST00000498205 TRAM1Q15629 374 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 ZNF77Q15935 545 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 SSX1Q16384 188 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 ZSWIM7Q19AV6 140 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 LRRC26Q2I0M4 334 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 DDI2Q5TDH0 399 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 KHDRBS2Q5VWX1 349 aaKnown RBP4.03□□□□□ -1.76
SSR3-209ENST00000498205 FAM219BQ5XKK7 198 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 RPL13AP3Q6NVV1 102 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 TMEM53Q6P2H8 277 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 CASP12Q6UXS9 341 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 TMPRSS11AQ6ZMR5 421 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 FCRLAQ7L513 359 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 GDPD3Q7L5L3 318 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 HSD11B1LQ7Z5J1 315 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 RAB43Q86YS6 212 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 PHC2Q8IXK0 858 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 PEX5LQ8IYB4 626 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 RDH10Q8IZV5 341 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 LSMEM1Q8N8F7 131 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 AQP11Q8NBQ7 271 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 DUSP18Q8NEJ0 188 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 NUP37Q8NFH4 326 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 OR10Q1Q8NGQ4 319 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 OR52N1Q8NH53 320 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 OR5K2Q8NHB8 316 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 ZNF519Q8TB69 540 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 RAET1EQ8TD07 263 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 KCNE4Q8WWG9 221 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 DEDD2Q8WXF8 326 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 SMPDL3AQ92484 453 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 GTF3AQ92664 365 aaKnown RBP4.03□□□□□ -1.76
SSR3-209ENST00000498205 AP2M1Q96CW1 435 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 ZNF486Q96H40 463 aaPredicted RBP4.03□□□□□ -1.76
SSR3-209ENST00000498205 TPD52L3Q96J77 140 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 PRRC1Q96M27 445 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 KCTD7Q96MP8 289 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 SDHCQ99643 169 aaPredicted RBP4.03□□□□□ -1.76
SSR3-209ENST00000498205 NIPSNAP1Q9BPW8 284 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 AIF1LQ9BQI0 150 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 CABLES2Q9BTV7 478 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 RIOK2Q9BVS4 552 aaKnown RBP4.03□□□□□ -1.76
SSR3-209ENST00000498205 FAIM2Q9BWQ8 316 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 PINK1Q9BXM7 581 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 SRRQ9GZT4 340 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 C6orf62Q9GZU0 229 aaPredicted RBP4.03□□□□□ -1.76
SSR3-209ENST00000498205 SLC22A4Q9H015 551 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 ATG10Q9H0Y0 220 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 ABCG8Q9H221 673 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 FN3KQ9H479 309 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 ARMC7Q9H6L4 198 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 ZDHHC6Q9H6R6 413 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 NIPAL2Q9H841 368 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 MIEF1Q9NQG6 463 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 TEX10Q9NXF1 929 aaPredicted RBP4.03□□□□□ -1.76
SSR3-209ENST00000498205 GPR83Q9NYM4 423 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 EMC3Q9P0I2 261 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 P2RX2Q9UBL9 471 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 IL36AQ9UHA7 158 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 ZNF229Q9UJW7 825 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 RNF150Q9ULK6 438 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 SSR3Q9UNL2 185 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 GSTK1Q9Y2Q3 226 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 V9GYH0 126 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 PCNX3Q9H6A9 2034 aa4.03□□□□□ -1.76
SSR3-209ENST00000498205 MUC22E2RYF6 1773 aaPredicted RBP4.02□□□□□ -1.77
SSR3-209ENST00000498205 A0A0A6YYD5 115 aa4.02□□□□□ -1.77
SSR3-209ENST00000498205 C5orf58C9J3I9 102 aa4.02□□□□□ -1.77
SSR3-209ENST00000498205 SGK494L7N484 410 aa4.02□□□□□ -1.77
SSR3-209ENST00000498205 HMGN4O00479 90 aa4.02□□□□□ -1.77
SSR3-209ENST00000498205 UBE2CO00762 179 aa4.02□□□□□ -1.77
SSR3-209ENST00000498205 SLC30A4O14863 429 aa4.02□□□□□ -1.77
SSR3-209ENST00000498205 GPX5O75715 221 aa4.02□□□□□ -1.77
SSR3-209ENST00000498205 CEACAM4O75871 244 aa4.02□□□□□ -1.77
SSR3-209ENST00000498205 RAB36O95755 333 aa4.02□□□□□ -1.77
SSR3-209ENST00000498205 C6orf47O95873 294 aa4.02□□□□□ -1.77
SSR3-209ENST00000498205 DNTTP04053 509 aa4.02□□□□□ -1.77
SSR3-209ENST00000498205 HLA-DPB1P04440 258 aa4.02□□□□□ -1.77
SSR3-209ENST00000498205 HMGN1P05114 100 aa4.02□□□□□ -1.77
SSR3-209ENST00000498205 KRT8P05787 483 aa4.02□□□□□ -1.77
SSR3-209ENST00000498205 CISD3P0C7P0 127 aa4.02□□□□□ -1.77
SSR3-209ENST00000498205 GSTT2P0CG29 244 aa4.02□□□□□ -1.77
SSR3-209ENST00000498205 GSTT2BP0CG30 244 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms