RNA–Protein interactions for RNA: ENST00000498041.1

RIF1-212, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 776 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-212ENST00000498041 ADRA2AP08913 450 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 WNT2P09544 360 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 GIMD1P0DJR0 217 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 CT45A10P0DMU9 189 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 COX4I1P13073 169 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 ATP1B2P14415 290 aaPredicted RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 STMN1P16949 149 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 HLA-DPA1P20036 260 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 IMPDH1P20839 514 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 ATP6V1B2P21281 511 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 PTPN4P29074 926 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 IMPA1P29218 277 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 PHBP35232 272 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 POLR2IP36954 125 aaKnown RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 SPAM1P38567 509 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 GPR1P46091 355 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 XCR1P46094 333 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 YAP1P46937 504 aaKnown RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 CSNK1EP49674 416 aaKnown RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 SERPINB8P50452 374 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 RPL14P50914 215 aaKnown RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 TPMTP51580 245 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 AIF1P55008 147 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 OR4D2P58180 307 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 SSTP61278 116 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 CDK16Q00536 496 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 GALK2Q01415 458 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 SRSF6Q13247 344 aaKnown RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 DDX39BQ13838 428 aaKnown RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 DOC2AQ14183 400 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 TGFBIQ15582 683 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 LRRC36Q1X8D7 754 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 ISXQ2M1V0 245 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 VPS26BQ4G0F5 336 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 AGKQ53H12 422 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 PYCR3Q53H96 274 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 SFT2D3Q587I9 215 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 C9orf129Q5T035 196 aaKnown RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 HENMT1Q5T8I9 393 aaKnown RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 PRAMEF7Q5VXH5 474 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 OTPQ5XKR4 325 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 SLC22A10Q63ZE4 541 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 PDPK2PQ6A1A2 396 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 RAET1GQ6H3X3 334 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 PPP1R2P3Q6NXS1 205 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 C16orf47Q6ZP98 133 aaPredicted RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 Q6ZPB1 254 aaPredicted RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 Q6ZSR6 202 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 PRSS48Q7RTY5 328 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 SNX20Q7Z614 316 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 TSEN54Q7Z6J9 526 aaKnown RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 LINC00523Q86TU6 105 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 IFNEQ86WN2 208 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 KRTAP11-1Q8IUC1 163 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 HS3ST5Q8IZT8 346 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 SLC34A3Q8N130 599 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 ZNF321PQ8N8H1 164 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 LINC01555Q8NAE3 123 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 OR4E2Q8NGC2 313 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 OR5T3Q8NGG3 340 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 OR52J3Q8NH60 311 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 CDC26Q8NHZ8 85 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 RFESDQ8TAC1 157 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 FNDC8Q8TC99 324 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 PNPT1Q8TCS8 783 aaKnown RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 SKA2Q8WVK7 121 aaPredicted RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 PYDC1Q8WXC3 89 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 FAM3CQ92520 227 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 CIDECQ96AQ7 238 aaPredicted RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 ELSPBP1Q96BH3 223 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 NUS1Q96E22 293 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 DTD2Q96FN9 168 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 PDXPQ96GD0 296 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 ITCHQ96J02 903 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 RILPQ96NA2 401 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 TTC25Q96NG3 672 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 PRAP1Q96NZ9 151 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 SLC29A1Q99808 456 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 CCDC77Q9BR77 488 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 THTPAQ9BU02 230 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 APOOQ9BUR5 198 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 SLC17A9Q9BYT1 436 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 NLNQ9BYT8 704 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 FRMD8P1Q9BZ68 369 aaPredicted RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 DRC3Q9H069 523 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 RSPH9Q9H1X1 276 aaPredicted RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 EHD1Q9H4M9 534 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 FAM124BQ9H5Z6 455 aaPredicted RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 LIN28AQ9H9Z2 209 aaKnown RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 MRM3Q9HC36 420 aaKnown RBP2.03□□□□□ -2.08
RIF1-212ENST00000498041 FAM60AQ9NP50 221 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 LHX9Q9NQ69 397 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 EXD2Q9NVH0 621 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 NKIRAS1Q9NYS0 192 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 SLC25A37Q9NYZ2 338 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 CD274Q9NZQ7 290 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 CCDC167Q9P0B6 97 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 COPS7AQ9UBW8 275 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 DCDC2Q9UHG0 476 aa2.03□□□□□ -2.08
RIF1-212ENST00000498041 PURGQ9UJV8 347 aaKnown RBP2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms