RNA–Protein interactions for RNA: ENST00000497488.1

BRCA1-224, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-224ENST00000497488 HOGA1Q86XE5 327 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 CRLF3Q8IUI8 442 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 SVOPLQ8N434 492 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 KIF2BQ8N4N8 673 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 NRACQ8N912 160 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 TMEM178AQ8NBL3 297 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 NECAP1Q8NC96 275 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 OR4Q3Q8NH05 313 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 FAM76AQ8TAV0 307 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 DUS3LQ96G46 650 aaKnown RBP5□□□□□ -1.61
BRCA1-224ENST00000497488 CENPNQ96H22 339 aaPredicted RBP5□□□□□ -1.61
BRCA1-224ENST00000497488 SEC22AQ96IW7 307 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 IL17FQ96PD4 163 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 PARD6GQ9BYG4 376 aaPredicted RBP5□□□□□ -1.61
BRCA1-224ENST00000497488 EXOSC3Q9NQT5 275 aaKnown RBP5□□□□□ -1.61
BRCA1-224ENST00000497488 TREX1Q9NSU2 369 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 ZNF446Q9NWS9 450 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 MLXQ9UH92 298 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 RIMS3Q9UJD0 308 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 SAMD4AQ9UPU9 718 aaKnown RBP5□□□□□ -1.61
BRCA1-224ENST00000497488 L3MBTL1Q9Y468 752 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 CNTNAP1P78357 1384 aa5□□□□□ -1.61
BRCA1-224ENST00000497488 MAP3K15Q6ZN16 1313 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 LOC100131303A0A0U1RQF7 123 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 TSPAN11A1L157 253 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 C15orf61A6NNL5 157 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 CDC7O00311 574 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 ZNF749O43361 778 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 UGT1A9O60656 530 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 IGHV2-5P01817 119 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 HBE1P02100 147 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 GP1BAP07359 652 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 TACSTD2P09758 323 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 SMIM10L1P0DMW3 83 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 RFC3P40938 356 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 GSSP48637 474 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 MLF1P58340 268 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 EXOC3L4Q17RC7 722 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 KCTD19Q17RG1 926 aaPredicted RBP4.99□□□□□ -1.61
BRCA1-224ENST00000497488 NDUFAF6Q330K2 333 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 MUC21Q5SSG8 566 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 THEM4Q5T1C6 240 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 ZNF626Q68DY1 528 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 ANKRD26P1Q6NSI1 321 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 CLEC18BQ6UXF7 455 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 C3P1Q6ZMU1 363 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.99□□□□□ -1.61
BRCA1-224ENST00000497488 SH2D5Q6ZV89 423 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 BHLHA9Q7RTU4 235 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 SETD3Q86TU7 594 aaPredicted RBP4.99□□□□□ -1.61
BRCA1-224ENST00000497488 UNC93AQ86WB7 457 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 CARM1Q86X55 608 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 LSMEM2Q8N112 164 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 PRELID2Q8N945 189 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 ACOT4Q8N9L9 421 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 OR10G7Q8NGN6 311 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 OR13A1Q8NGR1 328 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 OR51F2Q8NH61 342 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 OR56B4Q8NH76 319 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 OR2T6Q8NHC8 308 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 ZNF502Q8TBZ5 544 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 FANK1Q8TC84 345 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 SMIM10Q96HG1 83 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 ZFP3Q96NJ6 502 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 SORT1Q99523 831 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 MCHR1Q99705 422 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 CHRNA10Q9GZZ6 450 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 WDR54Q9H977 334 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 EML4Q9HC35 981 aaKnown RBP4.99□□□□□ -1.61
BRCA1-224ENST00000497488 SIRT7Q9NRC8 400 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 SLC2A6Q9UGQ3 507 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 LGALS13Q9UHV8 139 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 DLEC1Q9Y238 1755 aa4.99□□□□□ -1.61
BRCA1-224ENST00000497488 FANCIQ9NVI1 1328 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 ARHGEF17Q96PE2 2063 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-224ENST00000497488 ERVV-1B6SEH8 477 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 H3BN98 237 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 LIN7AO14910 233 aaPredicted RBP4.98□□□□□ -1.61
BRCA1-224ENST00000497488 MRPS12O15235 138 aaKnown RBP4.98□□□□□ -1.61
BRCA1-224ENST00000497488 BUB3O43684 328 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 MPDU1O75352 247 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 RBMXL2O75526 392 aaKnown RBP4.98□□□□□ -1.61
BRCA1-224ENST00000497488 RBBP9O75884 186 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 TOMM40O96008 361 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 ACTL6AO96019 429 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 ACSM4P0C7M7 580 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 HSD17B1P14061 328 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 HTR1FP30939 366 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 MAP2K2P36507 400 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 CEACAM3P40198 252 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 PRLHRP49683 370 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 CCR8P51685 355 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 PRELPP51888 382 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 UBE2KP61086 200 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 CALCOCO2Q13137 446 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 OR4D1Q15615 310 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 ATP6V1FQ16864 119 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 GPRC6AQ5T6X5 926 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 MEDAGQ5VYS4 303 aa4.98□□□□□ -1.61
BRCA1-224ENST00000497488 FAHD1Q6P587 224 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms