RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 CREB3L1Q96BA8 519 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 C8orf44Q96CB5 159 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 IFI27L2Q9H2X8 130 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 AUNIPQ9H7T9 357 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 WSB1Q9Y6I7 421 aa2.63□□□□□ -1.99
SMC4-225ENST00000497203 COL16A1Q07092 1604 aaPredicted RBP2.62□□□□□ -1.99
SMC4-225ENST00000497203 CIB4A0PJX0 185 aa2.62□□□□□ -1.99
SMC4-225ENST00000497203 SRP72O76094 671 aaKnown RBP2.62□□□□□ -1.99
SMC4-225ENST00000497203 IGLV2-23P01705 113 aa2.62□□□□□ -1.99
SMC4-225ENST00000497203 ERCC1P07992 297 aaPredicted RBP2.62□□□□□ -1.99
SMC4-225ENST00000497203 CCNB1P14635 433 aa2.62□□□□□ -1.99
SMC4-225ENST00000497203 UQCRFS1P47985 274 aa2.62□□□□□ -1.99
SMC4-225ENST00000497203 ATP5OP48047 213 aa2.62□□□□□ -1.99
SMC4-225ENST00000497203 STXBP1P61764 594 aaKnown RBP2.62□□□□□ -1.99
SMC4-225ENST00000497203 GBE1Q04446 702 aa2.62□□□□□ -1.99
SMC4-225ENST00000497203 GGTLC2Q14390 218 aa2.62□□□□□ -1.99
SMC4-225ENST00000497203 XKR4Q5GH76 650 aa2.62□□□□□ -1.99
SMC4-225ENST00000497203 TSPO2Q5TGU0 170 aa2.62□□□□□ -1.99
SMC4-225ENST00000497203 TWF2Q6IBS0 349 aaKnown RBP2.62□□□□□ -1.99
SMC4-225ENST00000497203 KRTAP5-5Q701N2 237 aaPredicted RBP2.62□□□□□ -1.99
SMC4-225ENST00000497203 CMC1Q7Z7K0 106 aa2.62□□□□□ -1.99
SMC4-225ENST00000497203 TMEM150AQ86TG1 271 aa2.62□□□□□ -1.99
SMC4-225ENST00000497203 LINC01551Q86U37 167 aa2.62□□□□□ -1.99
SMC4-225ENST00000497203 PCP2Q8IVA1 136 aa2.62□□□□□ -1.99
SMC4-225ENST00000497203 ZNF433Q8N7K0 673 aaPredicted RBP2.62□□□□□ -1.99
SMC4-225ENST00000497203 OR10G4Q8NGN3 311 aa2.62□□□□□ -1.99
SMC4-225ENST00000497203 OR5B3Q8NH48 314 aa2.62□□□□□ -1.99
SMC4-225ENST00000497203 IL22RA2Q969J5 263 aa2.62□□□□□ -1.99
SMC4-225ENST00000497203 LRRC58Q96CX6 371 aa2.62□□□□□ -1.99
SMC4-225ENST00000497203 NCOR1P1Q9H4R4 102 aa2.62□□□□□ -1.99
SMC4-225ENST00000497203 KCNJ16Q9NPI9 418 aa2.62□□□□□ -1.99
SMC4-225ENST00000497203 C20orf96Q9NUD7 363 aaPredicted RBP2.62□□□□□ -1.99
SMC4-225ENST00000497203 CCDC59Q9P031 241 aaKnown RBP2.62□□□□□ -1.99
SMC4-225ENST00000497203 OR12D3Q9UGF7 316 aa2.62□□□□□ -1.99
SMC4-225ENST00000497203 PRG3Q9Y2Y8 225 aaPredicted RBP2.62□□□□□ -1.99
SMC4-225ENST00000497203 ASTN1O14525 1302 aa2.62□□□□□ -1.99
SMC4-225ENST00000497203 SERTM2A0A1B0GWG4 89 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 H7C0C1 242 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 EIF4E2O60573 245 aaKnown RBP2.61□□□□□ -1.99
SMC4-225ENST00000497203 DPM1O60762 260 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 ACSM4P0C7M7 580 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 RAB3BP20337 219 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 STOMP27105 288 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 DCKP27707 260 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 CCR6P51684 374 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 ZNF136P52737 540 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 SLC25A11Q02978 314 aaKnown RBP2.61□□□□□ -1.99
SMC4-225ENST00000497203 MECOMQ03112 1051 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 MXD1Q05195 221 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 SELENBP1Q13228 472 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 CAPRIN1Q14444 709 aaKnown RBP2.61□□□□□ -1.99
SMC4-225ENST00000497203 KCTD19Q17RG1 926 aaPredicted RBP2.61□□□□□ -1.99
SMC4-225ENST00000497203 HSDL1Q3SXM5 330 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 SOHLH1Q5JUK2 328 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 IGFL2Q6UWQ7 119 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 MMAAQ8IVH4 418 aaKnown RBP2.61□□□□□ -1.99
SMC4-225ENST00000497203 CMTM1Q8IZ96 169 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 ZNF786Q8N393 782 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 COMMD1Q8N668 190 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 PRELID2Q8N945 189 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 Q8N9L7 120 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 SRSF12Q8WXF0 261 aaKnown RBP2.61□□□□□ -1.99
SMC4-225ENST00000497203 SEH1LQ96EE3 360 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 XPO6Q96QU8 1125 aaKnown RBP2.61□□□□□ -1.99
SMC4-225ENST00000497203 OR5B12Q96R08 314 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 SDHCQ99643 169 aaPredicted RBP2.61□□□□□ -1.99
SMC4-225ENST00000497203 LZTS2Q9BRK4 669 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 ISYNA1Q9NPH2 558 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 FAM49BQ9NUQ9 324 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 MTCH1Q9NZJ7 389 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 KCNE3Q9Y6H6 103 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 WDR62O43379 1518 aa2.61□□□□□ -1.99
SMC4-225ENST00000497203 IGLV2-33A0A075B6J2 118 aaPredicted RBP2.6□□□□□ -1.99
SMC4-225ENST00000497203 IGHV3-66A0A0C4DH42 116 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 LRRIQ4A6NIV6 560 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 TMX2-CTNND1H3BSU7 103 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 EIF3HO15372 352 aaKnown RBP eCLIP2.6□□□□□ -1.99
SMC4-225ENST00000497203 CD5LO43866 347 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 FKBP6O75344 327 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 FABP3P05413 133 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 FGF4P08620 206 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 CT45A6P0DMU7 189 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 CT45A5P0DMU8 189 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 CT45A7P0DMV0 189 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 BCKDHBP21953 392 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 WARSP23381 471 aaKnown RBP2.6□□□□□ -1.99
SMC4-225ENST00000497203 GPX4P36969 197 aaPredicted RBP2.6□□□□□ -1.99
SMC4-225ENST00000497203 EIF3EP60228 445 aaKnown RBP2.6□□□□□ -1.99
SMC4-225ENST00000497203 GINS1Q14691 196 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 QPRTQ15274 297 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 OR7A5Q15622 319 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 ZSCAN26Q16670 478 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 CT45A1Q5HYN5 189 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 HES5Q5TA89 166 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 AGBL2Q5U5Z8 902 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 TMEM53Q6P2H8 277 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 TMEM220Q6QAJ8 160 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 SPESP1Q6UW49 350 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 ENTHD1Q8IYW4 607 aa2.6□□□□□ -1.99
SMC4-225ENST00000497203 STPG2Q8N412 459 aa2.6□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms