RNA–Protein interactions for RNA: ENST00000497080.1

RAB3GAP1-206, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 5

Gene RAB3GAP1, Length 446 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-206ENST00000497080 CASC3O15234 703 aaKnown RBP2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 SLC31A2O15432 143 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 LCMT2O60294 686 aaKnown RBP2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 EIF1BO60739 113 aaKnown RBP2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 HCN1O60741 890 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 SNNO75324 88 aaPredicted RBP2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 RBBP9O75884 186 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 PIAS1O75925 651 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 SRP72O76094 671 aaKnown RBP2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 KCNK2O95069 426 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 TDP2O95551 362 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 RAB3DO95716 219 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 HSPA4LO95757 839 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 PTBP3O95758 552 aaKnown RBP2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 LALBAP00709 142 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 MBP02144 154 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 OPN1MWP04001 364 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 SERPINA5P05154 406 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 BPGMP07738 259 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 OR56A5P0C7T3 313 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 OPN1MW2P0DN77 364 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 OPN1MW3P0DN78 364 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 ANXA8P13928 327 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 TNNI1P19237 187 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 MYL9P24844 172 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 PTBP1P26599 531 aaKnown RBP eCLIP2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 RPL22P35268 128 aaKnown RBP2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 SAA4P35542 130 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 EIF1P41567 113 aaKnown RBP2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 DCCP43146 1447 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 RPS9P46781 194 aaKnown RBP2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 OR3A4PP47883 348 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 OR1D4P47884 311 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 ARFIP1P53367 373 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 PLA2G16P53816 162 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 CDH4P55283 916 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 ADAMTS12P58397 1594 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 RPS4XP62701 263 aaKnown RBP2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 ROR1Q01973 937 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 GLO1Q04760 184 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 BIKQ13323 160 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 BTN1A1Q13410 526 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 DDX39BQ13838 428 aaKnown RBP2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 TRAM2Q15035 370 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 ZMYND11Q15326 602 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 ATP6AP1Q15904 470 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 PSMD5Q16401 504 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 NRF1Q16656 503 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 MPPE1Q53F39 396 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 CDKL4Q5MAI5 379 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 GPRC6AQ5T6X5 926 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 LIN9Q5TKA1 542 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 ANXA8L1Q5VT79 327 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 RTL6Q6ICC9 239 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 RPL13AP3Q6NVV1 102 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 PLET1Q6UQ28 207 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 TEX261Q6UWH6 196 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 RASSF6Q6ZTQ3 369 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 GDPD3Q7L5L3 318 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 HSD17B13Q7Z5P4 300 aaPredicted RBP2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 SYVN1Q86TM6 617 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 TMEM17Q86X19 198 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 SIAH3Q8IW03 269 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 CPNE9Q8IYJ1 553 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 C12orf45Q8N5I9 185 aaPredicted RBP2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 OR52H1Q8NGJ2 320 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 ZNF461Q8TAF7 563 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 DYNC2LI1Q8TCX1 351 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 ZNF431Q8TF32 576 aaPredicted RBP2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 TCTEX1D2Q8WW35 142 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 FAM46BQ96A09 425 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 KIAA1143Q96AT1 154 aaPredicted RBP2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 ROPN1LQ96C74 230 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 SLC25A38Q96DW6 304 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 NARS2Q96I59 477 aaKnown RBP2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 ZBED3Q96IU2 234 aaPredicted RBP2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 RNF170Q96K19 258 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 GPR137Q96N19 417 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 ERMAPQ96PL5 475 aaPredicted RBP2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 PFDN5Q99471 154 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 GINS4Q9BRT9 223 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 COPS4Q9BT78 406 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 MED18Q9BUE0 208 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 C19orf24Q9BVV8 132 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 ROGDIQ9GZN7 287 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 DNTTIP1Q9H147 329 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 METTL9Q9H1A3 318 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 DCSTAMPQ9H295 470 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 CRLF2Q9HC73 371 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 NRN1Q9NPD7 142 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 PRMT8Q9NR22 394 aaPredicted RBP2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 NUDT15Q9NV35 164 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 THUMPD1Q9NXG2 353 aaKnown RBP2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 BABAM2Q9NXR7 383 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 ADA2Q9NZK5 511 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 TMEM216Q9P0N5 145 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 MYEF2Q9P2K5 600 aaKnown RBP2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 UXTQ9UBK9 157 aaPredicted RBP2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 CTSFQ9UBX1 484 aa2.72□□□□□ -1.97
RAB3GAP1-206ENST00000497080 BTNL2Q9UIR0 455 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms