RNA–Protein interactions for RNA: ENST00000496462.1

U2AF1-212, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 3,973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-212ENST00000496462 CRMP1Q14194 572 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 SEC23BQ15437 767 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 NRN1LQ496H8 165 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 KDM4DQ6B0I6 523 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 CXorf67Q86X51 503 aaPredicted RBP7.63□□□□□ -1.19
U2AF1-212ENST00000496462 ACBD7Q8N6N7 88 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 SPRYD4Q8WW59 207 aaPredicted RBP7.63□□□□□ -1.19
U2AF1-212ENST00000496462 CKLFQ9UBR5 152 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 GRIP1Q9Y3R0 1128 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 A0A0G2JNJ9 132 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 DOK2O60496 412 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 CST2P09228 141 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 B4GALT1P15291 398 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 DCKP27707 260 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 ZNF718Q3SXZ3 478 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 FAHD1Q6P587 224 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 IQCF1Q8N6M8 205 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 ZNF385AQ96PM9 386 aaKnown RBP7.63□□□□□ -1.19
U2AF1-212ENST00000496462 EGLN1Q9GZT9 426 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 SLC7A10Q9NS82 523 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 Q9UFV3 132 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 B9D1Q9UPM9 204 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 USP9XQ93008 2570 aaPredicted RBP7.63□□□□□ -1.19
U2AF1-212ENST00000496462 A0A096LPE4 126 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 A0A1W2PPZ6 126 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 ANXA2P2A6NMY6 339 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 C17orf51A8MQB3 221 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 FFAR1O14842 300 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 HTR1AP08908 422 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 IRF2P14316 349 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 MTNR1AP48039 350 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 NKPD1Q17RQ9 610 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 CTU2Q2VPK5 515 aaKnown RBP7.63□□□□□ -1.19
U2AF1-212ENST00000496462 ANKRD34AQ69YU3 496 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 NPEPL1Q8NDH3 523 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 CCDC54Q8NEL0 328 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 OR51G2Q8NGK0 314 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 AKAP1Q92667 903 aaKnown RBP eCLIP7.63□□□□□ -1.19
U2AF1-212ENST00000496462 NIPSNAP1Q9BPW8 284 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 WDR76Q9H967 626 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 MALT1Q9UDY8 824 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 MYRFQ9Y2G1 1151 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 ADAM18Q9Y3Q7 739 aa7.63□□□□□ -1.19
U2AF1-212ENST00000496462 OR5H1A6NKK0 313 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 A8MXE2 369 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 TRAF3IP2O43734 574 aaPredicted RBP7.62□□□□□ -1.19
U2AF1-212ENST00000496462 ZNF254O75437 659 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 TXNDC12O95881 172 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 IGHMP01871 453 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 HIST1H1CP16403 213 aaKnown RBP7.62□□□□□ -1.19
U2AF1-212ENST00000496462 DAPP51397 102 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 ZNF83P51522 516 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 SNRPD2P62316 118 aaKnown RBP7.62□□□□□ -1.19
U2AF1-212ENST00000496462 VWA1Q6PCB0 445 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 TFAP2EQ6VUC0 442 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 SLC46A3Q7Z3Q1 461 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 SLC37A3Q8NCC5 494 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 PTDSS2Q9BVG9 487 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 NUAK2Q9H093 628 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 FAM118AQ9NWS6 357 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 CMAHPQ9Y471 501 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 TNRC6AQ8NDV7 1962 aaKnown RBP7.62□□□□□ -1.19
U2AF1-212ENST00000496462 ZGRF1Q86YA3 2104 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 HIVEP3Q5T1R4 2406 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 H7C1C5 153 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 PYCR1P32322 319 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 LCN6P62502 163 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 EGR4Q05215 589 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 RAB35Q15286 201 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 PEG10Q86TG7 708 aaKnown RBP7.62□□□□□ -1.19
U2AF1-212ENST00000496462 SLC35F2Q8IXU6 374 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 ITFG2Q969R8 447 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 RNFT2Q96EX2 444 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 BOD1Q96IK1 185 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 TXNDC15Q96J42 360 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 TSPAN32Q96QS1 320 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 TMEM38BQ9NVV0 291 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 TAS2R5Q9NYW4 299 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 DNAJC27Q9NZQ0 273 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 KCNN3Q9UGI6 736 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 PCDHGB5Q9Y5G0 923 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 COL12A1Q99715 3063 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 CREBBPQ92793 2442 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 A1L4Q6 167 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 ZNF878C9JN71 531 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 PTGES3LE9PB15 166 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 MS4A18H0YCH9 400 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 ZNF593O00488 134 aaPredicted RBP7.62□□□□□ -1.19
U2AF1-212ENST00000496462 SEMG1P04279 462 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 ALPLP05186 524 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 CBR1P16152 277 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 ZNF20P17024 532 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 NAA10P41227 235 aaPredicted RBP7.62□□□□□ -1.19
U2AF1-212ENST00000496462 PIGFQ07326 219 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 MS4A18Q3C1V0 323 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 OGFRL1Q5TC84 451 aaPredicted RBP7.62□□□□□ -1.19
U2AF1-212ENST00000496462 ZNF704Q6ZNC4 412 aaPredicted RBP7.62□□□□□ -1.19
U2AF1-212ENST00000496462 SLC16A9Q7RTY1 509 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 SLC22A24Q8N4F4 322 aa7.62□□□□□ -1.19
U2AF1-212ENST00000496462 OR1K1Q8NGR3 316 aa7.62□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms