RNA–Protein interactions for RNA: ENST00000496335.1

PDAP1-204, Transcript of PDGFA associated protein 1, humanhuman

TSL 3

Gene PDAP1, Length 302 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDAP1-204ENST00000496335 INAFM1C9JVW0 142 aa12.45□□□□□ -0.42
PDAP1-204ENST00000496335 XKRYO14609 159 aa12.45□□□□□ -0.42
PDAP1-204ENST00000496335 CALB2P22676 271 aa12.45□□□□□ -0.42
PDAP1-204ENST00000496335 RRM2P31350 389 aa12.45□□□□□ -0.42
PDAP1-204ENST00000496335 PDLIM4P50479 330 aa12.45□□□□□ -0.42
PDAP1-204ENST00000496335 ERVS71-1P61550 626 aa12.45□□□□□ -0.42
PDAP1-204ENST00000496335 PSG4Q00888 419 aa12.45□□□□□ -0.42
PDAP1-204ENST00000496335 MS4A2Q01362 244 aa12.45□□□□□ -0.42
PDAP1-204ENST00000496335 HSF2Q03933 536 aa12.45□□□□□ -0.42
PDAP1-204ENST00000496335 TBC1D28Q2M2D7 210 aa12.45□□□□□ -0.42
PDAP1-204ENST00000496335 FOXL2NBQ6ZUU3 175 aa12.45□□□□□ -0.42
PDAP1-204ENST00000496335 NDEL1Q9GZM8 345 aa12.45□□□□□ -0.42
PDAP1-204ENST00000496335 RAB1BQ9H0U4 201 aa12.45□□□□□ -0.42
PDAP1-204ENST00000496335 TPK1Q9H3S4 243 aa12.45□□□□□ -0.42
PDAP1-204ENST00000496335 C1orf198Q9H425 327 aa12.45□□□□□ -0.42
PDAP1-204ENST00000496335 KRCC1Q9NPI7 259 aaPredicted RBP12.45□□□□□ -0.42
PDAP1-204ENST00000496335 DUSP13Q9UII6 198 aa12.45□□□□□ -0.42
PDAP1-204ENST00000496335 LOC100509620A0A075B734 347 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 TCRBV5S2A0A599 114 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 PRSS37A4D1T9 235 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 SOCS2O14508 198 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 SYNGR3O43761 229 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 OR10H3O60404 316 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 CLPTM1O96005 669 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 PTHP01270 115 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 CST2P09228 141 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 CSF3P09919 207 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 SLC25A16P16260 332 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 CTLA4P16410 223 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 CCNOP22674 350 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 STOMP27105 288 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 SDHAP31040 664 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 APLNRP35414 380 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 GUCA1AP43080 201 aaPredicted RBP12.44□□□□□ -0.42
PDAP1-204ENST00000496335 ALDH3B1P43353 468 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 EVX1P49640 407 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 RPS23P62266 143 aaKnown RBP12.44□□□□□ -0.42
PDAP1-204ENST00000496335 KRR1Q13601 381 aaKnown RBP12.44□□□□□ -0.42
PDAP1-204ENST00000496335 ENDOGQ14249 297 aaKnown RBP12.44□□□□□ -0.42
PDAP1-204ENST00000496335 MAD2L1BPQ15013 274 aaPredicted RBP12.44□□□□□ -0.42
PDAP1-204ENST00000496335 OTPQ5XKR4 325 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 SMARCD3Q6STE5 483 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 UGT2A3Q6UWM9 527 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 OR1J2Q8NGS2 313 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 POM121L2Q96KW2 1035 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 GPX7Q96SL4 187 aaPredicted RBP12.44□□□□□ -0.42
PDAP1-204ENST00000496335 ZNF416Q9BWM5 594 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 OR2H1Q9GZK4 316 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 WNT5BQ9H1J7 359 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 SYT4Q9H2B2 425 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 RERGLQ9H628 205 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 EMC7Q9NPA0 242 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 TAS2R1Q9NYW7 299 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 REV1Q9UBZ9 1251 aa12.44□□□□□ -0.42
PDAP1-204ENST00000496335 MALRD1Q5VYJ5 2156 aa12.43□□□□□ -0.42
PDAP1-204ENST00000496335 VWC2LB2RUY7 222 aa12.43□□□□□ -0.42
PDAP1-204ENST00000496335 M0R233 179 aa12.43□□□□□ -0.42
PDAP1-204ENST00000496335 SLC16A7O60669 478 aa12.43□□□□□ -0.42
PDAP1-204ENST00000496335 PPP1R3DO95685 299 aa12.43□□□□□ -0.42
PDAP1-204ENST00000496335 SNAP29O95721 258 aa12.43□□□□□ -0.42
PDAP1-204ENST00000496335 TP53P04637 393 aaPredicted RBP12.43□□□□□ -0.42
PDAP1-204ENST00000496335 LCKP06239 509 aa12.43□□□□□ -0.42
PDAP1-204ENST00000496335 MSR1P21757 451 aa12.43□□□□□ -0.42
PDAP1-204ENST00000496335 CDKN2AP42771 156 aaKnown RBP12.43□□□□□ -0.42
PDAP1-204ENST00000496335 UCP2P55851 309 aa12.43□□□□□ -0.42
PDAP1-204ENST00000496335 PPP2R2BQ00005 443 aa12.43□□□□□ -0.42
PDAP1-204ENST00000496335 LOXL1Q08397 574 aaPredicted RBP12.43□□□□□ -0.42
PDAP1-204ENST00000496335 DBPQ10586 325 aaPredicted RBP12.43□□□□□ -0.42
PDAP1-204ENST00000496335 TRIM25Q14258 630 aaKnown RBP12.43□□□□□ -0.42
PDAP1-204ENST00000496335 GPR139Q6DWJ6 353 aa12.43□□□□□ -0.42
PDAP1-204ENST00000496335 RGS7BPQ6MZT1 257 aaPredicted RBP12.43□□□□□ -0.42
PDAP1-204ENST00000496335 ZNF774Q6NX45 483 aa12.43□□□□□ -0.42
PDAP1-204ENST00000496335 DPY19L2P2Q6ZN68 376 aa12.43□□□□□ -0.42
PDAP1-204ENST00000496335 PTCHD4Q6ZW05 846 aa12.43□□□□□ -0.42
PDAP1-204ENST00000496335 DHFR2Q86XF0 187 aa12.43□□□□□ -0.42
PDAP1-204ENST00000496335 ARHGAP24Q8N264 748 aa12.43□□□□□ -0.42
PDAP1-204ENST00000496335 ICA1LQ8NDH6 482 aa12.43□□□□□ -0.42
PDAP1-204ENST00000496335 CLPTM1LQ96KA5 538 aa12.43□□□□□ -0.42
PDAP1-204ENST00000496335 LRMDAQ9H2I8 198 aa12.43□□□□□ -0.42
PDAP1-204ENST00000496335 POLE4Q9NR33 117 aa12.43□□□□□ -0.42
PDAP1-204ENST00000496335 FBXO9Q9UK97 447 aaPredicted RBP12.43□□□□□ -0.42
PDAP1-204ENST00000496335 TMCC3Q9ULS5 477 aa12.43□□□□□ -0.42
PDAP1-204ENST00000496335 TIMM10BQ9Y5J6 103 aa12.43□□□□□ -0.42
PDAP1-204ENST00000496335 LOC390937A0A1W2PQ73 354 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 C5orf49A4QMS7 147 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 LYNX1G3V0Z9 82 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 AHCYL1O43865 530 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 ERCC1P07992 297 aaPredicted RBP12.42□□□□□ -0.42
PDAP1-204ENST00000496335 LYNX1P0DP58 116 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 DAOP14920 347 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 FPR3P25089 353 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 WNT5AP41221 380 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 RAD52P43351 418 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 NR4A2P43354 598 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 RPS6KA3P51812 740 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 PPP1R8Q12972 351 aaKnown RBP12.42□□□□□ -0.42
PDAP1-204ENST00000496335 GGTLC2Q14390 218 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 TMEM249Q2WGJ8 235 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 RFX4Q33E94 735 aa12.42□□□□□ -0.42
PDAP1-204ENST00000496335 ALKBH6Q3KRA9 238 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms