RNA–Protein interactions for RNA: ENST00000496047.5

USP39-219, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 554 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-219ENST00000496047 MYBPHQ13203 477 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 DOC2BQ14184 412 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 TOMM20Q15388 145 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 GLYR1Q49A26 553 aaPredicted RBP6.21□□□□□ -1.42
USP39-219ENST00000496047 THEM4Q5T1C6 240 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 PRAMEF20Q5VT98 475 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 LIPNQ5VXI9 398 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 BICRALQ6AI39 1079 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 LCN10Q6JVE6 187 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 JMJD6Q6NYC1 403 aaPredicted RBP6.21□□□□□ -1.42
USP39-219ENST00000496047 DEGS2Q6QHC5 323 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 PLET1Q6UQ28 207 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 CCBE1Q6UXH8 406 aaPredicted RBP6.21□□□□□ -1.42
USP39-219ENST00000496047 RPTNQ6XPR3 784 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 ZNF704Q6ZNC4 412 aaPredicted RBP6.21□□□□□ -1.42
USP39-219ENST00000496047 C16orf47Q6ZP98 133 aaPredicted RBP6.21□□□□□ -1.42
USP39-219ENST00000496047 SNX29P2Q8IUI4 249 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 OR11G2Q8NGC1 345 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 OR2AJ1Q8NGZ0 328 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 RPS4Y2Q8TD47 263 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 PAQR8Q8TEZ7 354 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 CT55Q8WUE5 264 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 KCNE4Q8WWG9 221 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 RAB40AQ8WXH6 277 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 RFT1Q96AA3 541 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 DNAJA3Q96EY1 480 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 OXGR1Q96P68 337 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 TSSK2Q96PF2 358 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 UBL7Q96S82 380 aaPredicted RBP6.21□□□□□ -1.42
USP39-219ENST00000496047 PDCD1LG2Q9BQ51 273 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 C7orf50Q9BRJ6 194 aaKnown RBP6.21□□□□□ -1.42
USP39-219ENST00000496047 GPR87Q9BY21 358 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 ANGPTL4Q9BY76 406 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 RNF32Q9H0A6 362 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 MIXL1Q9H2W2 232 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 C12orf49Q9H741 205 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 NIPAL2Q9H841 368 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 NOX4Q9NPH5 578 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 TIGARQ9NQ88 270 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 POLE4Q9NR33 117 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 C14orf119Q9NWQ9 140 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 KLHL9Q9P2J3 617 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 B4GALT7Q9UBV7 327 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 SPATA2Q9UM82 520 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 BOKQ9UMX3 212 aaPredicted RBP6.21□□□□□ -1.42
USP39-219ENST00000496047 DHDHQ9UQ10 334 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 B3GALT1Q9Y5Z6 326 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 CHCHD2Q9Y6H1 151 aaPredicted RBP6.21□□□□□ -1.42
USP39-219ENST00000496047 V9GY05 133 aa6.21□□□□□ -1.42
USP39-219ENST00000496047 PTPRBP23467 1997 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 IGLV1-36A0A0B4J1U3 117 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 FAM240BA0A1B0GVZ2 78 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 A0A1W2PPL8 197 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 TRABD2BA6NFA1 517 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 TMEM200CA6NKL6 621 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 ADARB2-AS1A8MUL3 147 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 AIPO00170 330 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 GPR171O14626 319 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 EIF4EBP3O60516 100 aaPredicted RBP6.2□□□□□ -1.42
USP39-219ENST00000496047 FZD7O75084 574 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 KLF7O75840 302 aaPredicted RBP6.2□□□□□ -1.42
USP39-219ENST00000496047 AKR7A3O95154 331 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 UBL3O95164 117 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 ECDO95905 644 aaPredicted RBP6.2□□□□□ -1.42
USP39-219ENST00000496047 MT-CO3P00414 261 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 HLA-DQB1P01920 261 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 SERPINA7P05543 415 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 ZNF806P0C7X5 589 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 LIFP15018 202 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 IFNGR1P15260 489 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 HSD11B1P28845 292 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 SRD5A2P31213 254 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 SFTPDP35247 375 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 PTGDSP41222 190 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 CD97P48960 835 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 DNASE1L1P49184 302 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 ZNF84P51523 738 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 HCCSP53701 268 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 IFITM3Q01628 133 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 SLC17A1Q14916 467 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 TAF13Q15543 124 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 ZNF79Q15937 498 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 MEP1BQ16820 701 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 CEP78Q5JTW2 689 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 TEX30Q5JUR7 227 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 TMEM244Q5VVB8 128 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 C1QL3Q5VWW1 255 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 GLT8D1Q68CQ7 371 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 TCEAL6Q6IPX3 200 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 FDX2Q6P4F2 183 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 ARSKQ6UWY0 536 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 UNQ9370/PRO34162Q6UXP9 181 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.2□□□□□ -1.42
USP39-219ENST00000496047 GPAT4Q86UL3 456 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 GLB1L2Q8IW92 636 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 GTPBP8Q8N3Z3 284 aaPredicted RBP6.2□□□□□ -1.42
USP39-219ENST00000496047 RFLNBQ8N5W9 214 aa6.2□□□□□ -1.42
USP39-219ENST00000496047 ZNF433Q8N7K0 673 aaPredicted RBP6.2□□□□□ -1.42
USP39-219ENST00000496047 NLGN4YQ8NFZ3 816 aaPredicted RBP6.2□□□□□ -1.42
USP39-219ENST00000496047 OR2G2Q8NGZ5 317 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms