RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 SPIN4Q56A73 249 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 ZNF678Q5SXM1 525 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 C10orf25Q5T742 122 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 FAM71E1Q6IPT2 247 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 C11orf71Q6IPW1 123 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 KLC3Q6P597 504 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 CRIP3Q6Q6R5 217 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 B3GLCTQ6Y288 498 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 SH2D5Q6ZV89 423 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 GPRIN3Q6ZVF9 776 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 PLEKHM3Q6ZWE6 761 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 GALNT10Q86SR1 603 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 FGFBP3Q8TAT2 258 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 C16orf78Q8WTQ4 265 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 SLC38A5Q8WUX1 472 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 DCAKDQ8WVC6 231 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 SELENOMQ8WWX9 145 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 ZNF524Q96C55 264 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 MTBPQ96DY7 904 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 GIMAP5Q96F15 307 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 GMPPAQ96IJ6 420 aaPredicted RBP3.67□□□□□ -1.82
VPS52-222ENST00000495981 FCRL1Q96LA6 429 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 C16orf45Q96MC5 204 aaPredicted RBP3.67□□□□□ -1.82
VPS52-222ENST00000495981 RNF145Q96MT1 663 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 AMDHD1Q96NU7 426 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 KCNA7Q96RP8 456 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 ATG101Q9BSB4 218 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 TRAF4Q9BUZ4 470 aaPredicted RBP3.67□□□□□ -1.82
VPS52-222ENST00000495981 POTEKPQ9BYX7 375 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 STMN4Q9H169 189 aaPredicted RBP3.67□□□□□ -1.82
VPS52-222ENST00000495981 CDC42EP4Q9H3Q1 356 aaKnown RBP3.67□□□□□ -1.82
VPS52-222ENST00000495981 DSN1Q9H410 356 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 TMEM185BQ9H7F4 350 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 KRCC1Q9NPI7 259 aaPredicted RBP3.67□□□□□ -1.82
VPS52-222ENST00000495981 MED17Q9NVC6 651 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 MED11Q9P086 117 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 B3GAT1Q9P2W7 334 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 ING1Q9UK53 422 aaPredicted RBP3.67□□□□□ -1.82
VPS52-222ENST00000495981 EMCNQ9ULC0 261 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 TMCO1Q9UM00 188 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 SNX6Q9UNH7 406 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 PROCRQ9UNN8 238 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 RNF115Q9Y4L5 304 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 PTGDR2Q9Y5Y4 395 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 AP4B1Q9Y6B7 739 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 ZNF780BQ9Y6R6 833 aa3.67□□□□□ -1.82
VPS52-222ENST00000495981 YLPM1P49750 1951 aaKnown RBP3.67□□□□□ -1.82
VPS52-222ENST00000495981 IGHV4-30-2A0A087WSY4 118 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 TEX13DA0A0J9YY54 714 aaPredicted RBP3.66□□□□□ -1.82
VPS52-222ENST00000495981 LOC100653049A0A140TA62 436 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 C13orf42A0A1B0GVH6 325 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 A0A1W2PPW3 197 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 SHISA9B4DS77 424 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 TNFSF11O14788 317 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 CXCL13O43927 109 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 GMFGO60234 142 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 KRT34O76011 436 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 NTN1O95631 604 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 OXSR1O95747 527 aaPredicted RBP3.66□□□□□ -1.82
VPS52-222ENST00000495981 ANGPTL1O95841 491 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 CD8AP01732 235 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 ACP2P11117 423 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 TBXA2RP21731 343 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 ELK4P28324 431 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 HSD17B3P37058 310 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 NCBP2P52298 156 aaKnown RBP eCLIP3.66□□□□□ -1.82
VPS52-222ENST00000495981 NUDT6P53370 316 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 KRTAP10-2P60368 255 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 MRPS22P82650 360 aaKnown RBP3.66□□□□□ -1.82
VPS52-222ENST00000495981 CAV1Q03135 178 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 BSPH1Q075Z2 132 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 PLA2G7Q13093 441 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 LCP2Q13094 533 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 PDE7AQ13946 482 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 GAMTQ14353 236 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 TAB1Q15750 504 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 UAP1Q16222 522 aaPredicted RBP3.66□□□□□ -1.82
VPS52-222ENST00000495981 DUSP5Q16690 384 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 TMEM249Q2WGJ8 235 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 SPATS1Q496A3 300 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 ZNF672Q499Z4 452 aaPredicted RBP3.66□□□□□ -1.82
VPS52-222ENST00000495981 GLYR1Q49A26 553 aaPredicted RBP3.66□□□□□ -1.82
VPS52-222ENST00000495981 NCMAPQ5T1S8 102 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 DDX59Q5T1V6 619 aaKnown RBP eCLIP3.66□□□□□ -1.825e-10■□□□□ 8.6
VPS52-222ENST00000495981 LGSNQ5TDP6 509 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 TTC19Q6DKK2 380 aaPredicted RBP3.66□□□□□ -1.82
VPS52-222ENST00000495981 MARCH3Q86UD3 253 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 SAMD14Q8IZD0 417 aaPredicted RBP3.66□□□□□ -1.82
VPS52-222ENST00000495981 Q8N1X5 172 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 BANPQ8N9N5 519 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 GATSQ8NAP1 163 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 OR2V1Q8NHB1 315 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 PSMA8Q8TAA3 256 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 FBXO30Q8TB52 745 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 PIK3R3Q92569 461 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 TMEM186Q96B77 213 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 COQ8BQ96D53 544 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 L3HYPDHQ96EM0 354 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 DTNBP1Q96EV8 351 aa3.66□□□□□ -1.82
VPS52-222ENST00000495981 MS4A4EQ96PG1 132 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms