RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 TSPAN4O14817 238 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 ZNF432O94892 652 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 SPDEFO95238 335 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 NR0B1P51843 470 aaKnown RBP11.72□□□□□ -0.53
PTPN7-217ENST00000495688 ADAM8P78325 824 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 KIAA0895LQ68EN5 471 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 TMEM225Q6GV28 225 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 TSSK4Q6SA08 328 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 ZNF627Q7L945 461 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 ZNF679Q8IYX0 411 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 GALNT16Q8N428 558 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 ASB5Q8WWX0 329 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 PTDSS2Q9BVG9 487 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 TINAGL1Q9GZM7 467 aaPredicted RBP11.72□□□□□ -0.53
PTPN7-217ENST00000495688 APMAPQ9HDC9 416 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 TAS2R4Q9NYW5 299 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 MRPS18BQ9Y676 258 aaKnown RBP11.72□□□□□ -0.53
PTPN7-217ENST00000495688 CDC40O60508 579 aaKnown RBP eCLIP11.72□□□□□ -0.53
PTPN7-217ENST00000495688 ALOX12BO75342 701 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 OR6A2O95222 327 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 HLA-DOBP13765 273 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 RORAP35398 523 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 BTN1A1Q13410 526 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 SERTAD2Q14140 314 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 MOGAT2Q3SYC2 334 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 C17orf107Q6ZR85 190 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 MRPL38Q96DV4 380 aaKnown RBP11.72□□□□□ -0.53
PTPN7-217ENST00000495688 SLC38A3Q99624 504 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 NUDT9Q9BW91 350 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 TAS2R8Q9NYW2 309 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 FBXL2Q9UKC9 423 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 FBXO4Q9UKT5 387 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 MMP17Q9ULZ9 603 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 PLCL2Q9UPR0 1127 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 CNTRLQ7Z7A1 2325 aa11.72□□□□□ -0.53
PTPN7-217ENST00000495688 HMSDA8MTL9 139 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 CDK2AP1O14519 115 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 LMX1BO60663 402 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 DDAH2O95865 285 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 IGKV3-11P04433 115 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 LIPCP11150 499 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 IL11P20809 199 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 VWA2Q5GFL6 755 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.71□□□□□ -0.53
PTPN7-217ENST00000495688 FAM166AQ6J272 317 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 TMEM81Q6P7N7 255 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 GSG1LQ6UXU4 331 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 KRT77Q7Z794 578 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 GABRG1Q8N1C3 465 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 STPG2Q8N412 459 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 RNF128Q8TEB7 428 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 ZNF721Q8TF20 911 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 SLC25A28Q96A46 364 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 SEH1LQ96EE3 360 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 KLHDC7BQ96G42 594 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 ZNF285Q96NJ3 590 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 SLC46A1Q96NT5 459 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 ABHD6Q9BV23 337 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 LAT2Q9GZY6 243 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 TTYH1Q9H313 450 aaPredicted RBP11.71□□□□□ -0.53
PTPN7-217ENST00000495688 DHDHQ9UQ10 334 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 DMDP11532 3685 aa11.71□□□□□ -0.53
PTPN7-217ENST00000495688 CABIN1Q9Y6J0 2220 aa11.71□□□□□ -0.54
PTPN7-217ENST00000495688 TRAV36DV7A0A075B6V5 113 aa11.71□□□□□ -0.54
PTPN7-217ENST00000495688 IGLV1-36A0A0B4J1U3 117 aa11.71□□□□□ -0.54
PTPN7-217ENST00000495688 BLACEA4D250 179 aa11.71□□□□□ -0.54
PTPN7-217ENST00000495688 C10orf142B7Z368 130 aa11.71□□□□□ -0.54
PTPN7-217ENST00000495688 SLC25A12O75746 678 aa11.71□□□□□ -0.54
PTPN7-217ENST00000495688 CSN2P05814 226 aa11.71□□□□□ -0.54
PTPN7-217ENST00000495688 RPL27P61353 136 aaKnown RBP11.71□□□□□ -0.54
PTPN7-217ENST00000495688 NR0B2Q15466 257 aa11.71□□□□□ -0.54
PTPN7-217ENST00000495688 TEX30Q5JUR7 227 aa11.71□□□□□ -0.54
PTPN7-217ENST00000495688 C9orf40Q8IXQ3 194 aa11.71□□□□□ -0.54
PTPN7-217ENST00000495688 ZBTB44Q8NCP5 570 aa11.71□□□□□ -0.54
PTPN7-217ENST00000495688 OR6M1Q8NGM8 313 aa11.71□□□□□ -0.54
PTPN7-217ENST00000495688 ADAMTS18Q8TE60 1221 aa11.71□□□□□ -0.54
PTPN7-217ENST00000495688 GPX8Q8TED1 209 aa11.71□□□□□ -0.54
PTPN7-217ENST00000495688 C8orf44Q96CB5 159 aa11.71□□□□□ -0.54
PTPN7-217ENST00000495688 NPAS1Q99742 590 aa11.71□□□□□ -0.54
PTPN7-217ENST00000495688 LRP12Q9Y561 859 aa11.71□□□□□ -0.54
PTPN7-217ENST00000495688 FRG2CA6NGY1 282 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 SHISA7A6NL88 538 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 SIGLEC5O15389 551 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 NUPL2O15504 423 aaKnown RBP11.7□□□□□ -0.54
PTPN7-217ENST00000495688 B3GALNT1O75752 331 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 RLN2P04090 185 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 PPP3CBP16298 524 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 ATF4P18848 351 aaPredicted RBP11.7□□□□□ -0.54
PTPN7-217ENST00000495688 ZP3P21754 424 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 IL12BP29460 328 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 NUP62P37198 522 aaPredicted RBP11.7□□□□□ -0.54
PTPN7-217ENST00000495688 SCAND1P57086 179 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 SPOCK1Q08629 439 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 SIGLEC14Q08ET2 396 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 EIF2B1Q14232 305 aaKnown RBP11.7□□□□□ -0.54
PTPN7-217ENST00000495688 ZNF660Q6AZW8 331 aaPredicted RBP11.7□□□□□ -0.54
PTPN7-217ENST00000495688 SLC18B1Q6NT16 456 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 WDFY1Q8IWB7 410 aa11.7□□□□□ -0.54
PTPN7-217ENST00000495688 RELL2Q8NC24 303 aaPredicted RBP11.7□□□□□ -0.54
PTPN7-217ENST00000495688 ZNF519Q8TB69 540 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms