RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 TRIM15Q9C019 465 aa15.22■□□□□ 0.03
HDAC4-211ENST00000494800 GPR160Q9UJ42 338 aa15.22■□□□□ 0.03
HDAC4-211ENST00000494800 TIMM10BQ9Y5J6 103 aa15.22■□□□□ 0.03
HDAC4-211ENST00000494800 PLCE1Q9P212 2302 aa15.21■□□□□ 0.03
HDAC4-211ENST00000494800 IGHV4-30-2A0A087WSY4 118 aa15.21■□□□□ 0.03
HDAC4-211ENST00000494800 M0R233 179 aa15.21■□□□□ 0.03
HDAC4-211ENST00000494800 NDUFS8O00217 210 aa15.21■□□□□ 0.03
HDAC4-211ENST00000494800 SYNGR3O43761 229 aa15.21■□□□□ 0.03
HDAC4-211ENST00000494800 GPRIN2O60269 458 aa15.21■□□□□ 0.03
HDAC4-211ENST00000494800 T-ENOLP0DO92 83 aa15.21■□□□□ 0.03
HDAC4-211ENST00000494800 APEHP13798 732 aaKnown RBP15.21■□□□□ 0.03
HDAC4-211ENST00000494800 ZNF32P17041 273 aa15.21■□□□□ 0.03
HDAC4-211ENST00000494800 STOMP27105 288 aa15.21■□□□□ 0.03
HDAC4-211ENST00000494800 LAP3P28838 519 aa15.21■□□□□ 0.03
HDAC4-211ENST00000494800 SLC6A6P31641 620 aa15.21■□□□□ 0.03
HDAC4-211ENST00000494800 RGS7BPQ6MZT1 257 aaPredicted RBP15.21■□□□□ 0.03
HDAC4-211ENST00000494800 DNM1P34Q6PK57 102 aa15.21■□□□□ 0.03
HDAC4-211ENST00000494800 FOXL2NBQ6ZUU3 175 aa15.21■□□□□ 0.03
HDAC4-211ENST00000494800 ZER1Q7Z7L7 766 aa15.21■□□□□ 0.03
HDAC4-211ENST00000494800 SYT9Q86SS6 491 aa15.21■□□□□ 0.03
HDAC4-211ENST00000494800 GNPDA2Q8TDQ7 276 aa15.21■□□□□ 0.03
HDAC4-211ENST00000494800 PIMREGQ9BSJ6 248 aa15.21■□□□□ 0.03
HDAC4-211ENST00000494800 MS4A5Q9H3V2 200 aa15.21■□□□□ 0.03
HDAC4-211ENST00000494800 EIF3KQ9UBQ5 218 aaKnown RBP15.21■□□□□ 0.03
HDAC4-211ENST00000494800 IL20RAQ9UHF4 553 aa15.21■□□□□ 0.03
HDAC4-211ENST00000494800 IER3IP1Q9Y5U9 82 aa15.21■□□□□ 0.03
HDAC4-211ENST00000494800 ALPK2Q86TB3 2170 aa15.21■□□□□ 0.02
HDAC4-211ENST00000494800 ACANP16112 2415 aa15.21■□□□□ 0.02
HDAC4-211ENST00000494800 A0A1W2PPW3 197 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 TNFRSF11BO00300 401 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 SOCS2O14508 198 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 LCKP06239 509 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 FAM157BP0CG42 384 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 CCL2P13500 99 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 ZNF26P17031 533 aaPredicted RBP15.2■□□□□ 0.02
HDAC4-211ENST00000494800 CCNOP22674 350 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 APEX1P27695 318 aaKnown RBP15.2■□□□□ 0.02
HDAC4-211ENST00000494800 PCSK6P29122 969 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 NOS3P29474 1203 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 GDI2P50395 445 aaKnown RBP15.2■□□□□ 0.02
HDAC4-211ENST00000494800 PPP2R2BQ00005 443 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 CARTPTQ16568 116 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 RFX4Q33E94 735 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 DNAL1Q4LDG9 190 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 THSD4Q6ZMP0 1018 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 ZNF540Q8NDQ6 660 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 C10orf105Q8TEF2 133 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 C11orf40Q8WZ69 217 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 CCDC124Q96CT7 223 aaKnown RBP15.2■□□□□ 0.02
HDAC4-211ENST00000494800 RASD2Q96D21 266 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 SYT3Q9BQG1 590 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 MRPL37Q9BZE1 423 aaKnown RBP15.2■□□□□ 0.02
HDAC4-211ENST00000494800 OR52D1Q9H346 318 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 RERGLQ9H628 205 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 POLE4Q9NR33 117 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 TAS2R1Q9NYW7 299 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 DUSP13Q9UII6 198 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 MTORP42345 2549 aa15.2■□□□□ 0.02
HDAC4-211ENST00000494800 LOC390937A0A1W2PQ73 354 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 IMPA2O14732 288 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 GYG2O15488 501 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 SLC16A7O60669 478 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 KHDRBS3O75525 346 aaKnown RBP15.19■□□□□ 0.02
HDAC4-211ENST00000494800 ADRA2AP08913 450 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 MAGEA2P43356 314 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 UCP2P55851 309 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 SCRN3Q0VDG4 424 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 TSPAN31Q12999 210 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 MOGQ16653 247 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 RPL13AP3Q6NVV1 102 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 C1orf94Q6P1W5 598 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 ARL9Q6T311 187 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 JAZF1Q86VZ6 243 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 GLB1L2Q8IW92 636 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 C1orf174Q8IYL3 243 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 MAPK1IP1LQ8NDC0 245 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 ICA1LQ8NDH6 482 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 ERMAPQ96PL5 475 aaPredicted RBP15.19■□□□□ 0.02
HDAC4-211ENST00000494800 THTPAQ9BU02 230 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 IFT27Q9BW83 186 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 OR2H1Q9GZK4 316 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 SYT4Q9H2B2 425 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 REEP1Q9H902 201 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 VSX1Q9NZR4 365 aaPredicted RBP15.19■□□□□ 0.02
HDAC4-211ENST00000494800 REV1Q9UBZ9 1251 aa15.19■□□□□ 0.02
HDAC4-211ENST00000494800 NDRG4Q9ULP0 352 aaKnown RBP15.19■□□□□ 0.02
HDAC4-211ENST00000494800 TCRBV5S2A0A599 114 aa15.18■□□□□ 0.02
HDAC4-211ENST00000494800 TMEM129A0AVI4 362 aa15.18■□□□□ 0.02
HDAC4-211ENST00000494800 C5orf49A4QMS7 147 aa15.18■□□□□ 0.02
HDAC4-211ENST00000494800 LY6HO94772 140 aa15.18■□□□□ 0.02
HDAC4-211ENST00000494800 CCNB2O95067 398 aa15.18■□□□□ 0.02
HDAC4-211ENST00000494800 PPP1R3DO95685 299 aa15.18■□□□□ 0.02
HDAC4-211ENST00000494800 TXNDC12O95881 172 aa15.18■□□□□ 0.02
HDAC4-211ENST00000494800 RENP00797 406 aa15.18■□□□□ 0.02
HDAC4-211ENST00000494800 HOXB6P17509 224 aaKnown RBP15.18■□□□□ 0.02
HDAC4-211ENST00000494800 CRABP1P29762 137 aa15.18■□□□□ 0.02
HDAC4-211ENST00000494800 HMGA2P52926 109 aa15.18■□□□□ 0.02
HDAC4-211ENST00000494800 KLF3P57682 345 aaPredicted RBP15.18■□□□□ 0.02
HDAC4-211ENST00000494800 PSG4Q00888 419 aa15.18■□□□□ 0.02
HDAC4-211ENST00000494800 TRAP1Q12931 704 aaKnown RBP15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms