RNA–Protein interactions for RNA: ENST00000494334.1

COL1A1-208, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 396 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-208ENST00000494334 AKAP6Q13023 2319 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 IGLV1-36A0A0B4J1U3 117 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 ATE1O95260 518 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 CRYAAP02489 173 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 SERPINA5P05154 406 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 CST2P09228 141 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 DANCRP0C864 163 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 ZNF32P17041 273 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 MSR1P21757 451 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 DNASE1P24855 282 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 POU1F1P28069 291 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 ENDOGQ14249 297 aaKnown RBP11.75□□□□□ -0.53
COL1A1-208ENST00000494334 TMEM53Q6P2H8 277 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 DNM1P34Q6PK57 102 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 UGT2A3Q6UWM9 527 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 C20orf204Q6ZNR8 217 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 GLB1L2Q8IW92 636 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 C10orf67Q8IYJ2 551 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 SVOPLQ8N434 492 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 IQCF1Q8N6M8 205 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 CYB561A3Q8NBI2 242 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 SLC37A3Q8NCC5 494 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 IL17RDQ8NFM7 739 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 DNAJC9Q8WXX5 260 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 KCNS3Q9BQ31 491 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 ZNF416Q9BWM5 594 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 RACGAP1Q9H0H5 632 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 FN3KQ9H479 309 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 EMC7Q9NPA0 242 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 KIF17Q9P2E2 1029 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 FKBP7Q9Y680 259 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 ATP23Q9Y6H3 246 aa11.75□□□□□ -0.53
COL1A1-208ENST00000494334 IGHV2OR16-5A0A0B4J2B6 119 aa11.74□□□□□ -0.53
COL1A1-208ENST00000494334 MPZL1O95297 269 aa11.74□□□□□ -0.53
COL1A1-208ENST00000494334 GPANK1O95872 356 aa11.74□□□□□ -0.53
COL1A1-208ENST00000494334 ZNF35P13682 527 aa11.74□□□□□ -0.53
COL1A1-208ENST00000494334 CDK5Q00535 292 aa11.74□□□□□ -0.53
COL1A1-208ENST00000494334 PSG4Q00888 419 aa11.74□□□□□ -0.53
COL1A1-208ENST00000494334 CRMP1Q14194 572 aa11.74□□□□□ -0.53
COL1A1-208ENST00000494334 GINS1Q14691 196 aa11.74□□□□□ -0.53
COL1A1-208ENST00000494334 PGGHGQ32M88 737 aa11.74□□□□□ -0.53
COL1A1-208ENST00000494334 OTPQ5XKR4 325 aa11.74□□□□□ -0.53
COL1A1-208ENST00000494334 ACSM5Q6NUN0 579 aa11.74□□□□□ -0.53
COL1A1-208ENST00000494334 SLC27A4Q6P1M0 643 aa11.74□□□□□ -0.53
COL1A1-208ENST00000494334 ZBTB46Q86UZ6 589 aa11.74□□□□□ -0.53
COL1A1-208ENST00000494334 SMAP2Q8WU79 429 aaPredicted RBP11.74□□□□□ -0.53
COL1A1-208ENST00000494334 IGFBPL1Q8WX77 278 aa11.74□□□□□ -0.53
COL1A1-208ENST00000494334 C11orf40Q8WZ69 217 aa11.74□□□□□ -0.53
COL1A1-208ENST00000494334 DHRS9Q9BPW9 319 aa11.74□□□□□ -0.53
COL1A1-208ENST00000494334 GABARAPL1Q9H0R8 117 aa11.74□□□□□ -0.53
COL1A1-208ENST00000494334 S100A14Q9HCY8 104 aa11.74□□□□□ -0.53
COL1A1-208ENST00000494334 CCNB1IP1Q9NPC3 277 aa11.74□□□□□ -0.53
COL1A1-208ENST00000494334 PAPOLBQ9NRJ5 636 aaKnown RBP11.74□□□□□ -0.53
COL1A1-208ENST00000494334 CMC2Q9NRP2 79 aa11.74□□□□□ -0.53
COL1A1-208ENST00000494334 KLHL21Q9UJP4 597 aa11.74□□□□□ -0.53
COL1A1-208ENST00000494334 FBXL3Q9UKT7 428 aa11.74□□□□□ -0.53
COL1A1-208ENST00000494334 OAZ3Q9UMX2 235 aa11.74□□□□□ -0.53
COL1A1-208ENST00000494334 SAC3D1A6NKF1 404 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 FAM171A2A8MVW0 826 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 ANKRD65E5RJM6 399 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 MITFO75030 526 aaPredicted RBP11.73□□□□□ -0.53
COL1A1-208ENST00000494334 POLQO75417 2590 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 SOD3P08294 240 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 GAAP10253 952 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 GRK5P34947 590 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 CENPAP49450 140 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 CRISP1P54107 249 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 PCBD1P61457 104 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 LSM6P62312 80 aaKnown RBP11.73□□□□□ -0.53
COL1A1-208ENST00000494334 HGFACQ04756 655 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 KCNMB1Q16558 191 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 PABPC1L2AQ5JQF8 200 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 KDM4DQ6B0I6 523 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 SYT9Q86SS6 491 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 PARP8Q8N3A8 854 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 ICA1LQ8NDH6 482 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 CPEB3Q8NE35 698 aaKnown RBP11.73□□□□□ -0.53
COL1A1-208ENST00000494334 ZNRF4Q8WWF5 429 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 PIGTQ969N2 578 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 CCL19Q99731 98 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 WACQ9BTA9 647 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 RBM4Q9BWF3 364 aaKnown RBP11.73□□□□□ -0.53
COL1A1-208ENST00000494334 OR2H1Q9GZK4 316 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 ITGB1BP2Q9UKP3 347 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 LAMP3Q9UQV4 416 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 TIMM10BQ9Y5J6 103 aa11.73□□□□□ -0.53
COL1A1-208ENST00000494334 RAI1Q7Z5J4 1906 aaPredicted RBP11.72□□□□□ -0.53
COL1A1-208ENST00000494334 IQCMA0A1B0GVH7 501 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 C12orf71A8MTZ7 269 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 PTHP01270 115 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 IFNGP01579 166 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 TFP02787 698 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 CCL2P13500 99 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 TTKP33981 857 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 FABP6P51161 128 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 PPP2R2BQ00005 443 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 HSF2Q03933 536 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 GLO1Q04760 184 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 PLP2Q04941 152 aa11.72□□□□□ -0.53
COL1A1-208ENST00000494334 MEP1BQ16820 701 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms