RNA–Protein interactions for RNA: ENST00000494248.1

PTPN12-212, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 470 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-212ENST00000494248 BDKRB1P46663 353 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 GABRA4P48169 554 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 P2RY4P51582 365 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 CAV2P51636 162 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 AP2S1P53680 142 aaPredicted RBP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 TMEM33P57088 247 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 BRWD1-AS2P59051 145 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 TAS2R60P59551 318 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 DCDC1P59894 354 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 UBE2MP61081 183 aaKnown RBP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 TFAMQ00059 246 aaKnown RBP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 AESQ08117 197 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 RIPPLY1Q0D2K3 151 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 CNTN1Q12860 1018 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 MLLT11Q13015 90 aaPredicted RBP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 GAGE5Q13069 117 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 GAGE6Q13070 117 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 GPR17Q13304 367 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 AQP6Q13520 282 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 KRR1Q13601 381 aaKnown RBP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 VGLL4Q14135 290 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 POU6F1Q14863 301 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 GPNMBQ14956 572 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 ARL6IP1Q15041 203 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 SF3A2Q15428 464 aaKnown RBP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 GABRA6Q16445 453 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 DGUOKQ16854 277 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 ISXQ2M1V0 245 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 CYBRD1Q53TN4 286 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 DMRTC1Q5HYR2 192 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 SOHLH1Q5JUK2 328 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 SLC35D3Q5M8T2 416 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 PPM1LQ5SGD2 360 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 CCNJQ5T5M9 372 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 HACD4Q5VWC8 232 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 MEDAGQ5VYS4 303 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 TRIQKQ629K1 86 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 FRMPD2BQ6IN97 320 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 NIPAL1Q6NVV3 410 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 ZNF544Q6NX49 715 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 FAAP20Q6NZ36 180 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 STEAP1BQ6NZ63 245 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 EMBQ6PCB8 327 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 RBMS3Q6XE24 437 aaKnown RBP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 Q6ZRG5 221 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 SLC25A48Q6ZT89 311 aaKnown RBP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 RFPL4BQ6ZWI9 263 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 LYG2Q86SG7 212 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 MRPL52Q86TS9 123 aaKnown RBP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 TMEM139Q8IV31 216 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 ODF3L1Q8IXM7 274 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 PRSS58Q8IYP2 241 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 PUSL1Q8N0Z8 303 aaKnown RBP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 PDIK1LQ8N165 341 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 MS4A15Q8N5U1 240 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 LRTM2Q8N967 370 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 ACVR1CQ8NER5 493 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 PXT1Q8NFP0 134 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 OR11H4Q8NGC9 324 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 OR51D1Q8NGF3 324 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 OR5L1Q8NGL2 311 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 OR1B1Q8NGR6 318 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 OR51A7Q8NH64 312 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 OR5R1Q8NH85 324 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 ITFG1Q8TB96 612 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 SYNPRQ8TBG9 265 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 CD99L2Q8TCZ2 262 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 BLOC1S5Q8TDH9 187 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 RNASEH2CQ8TDP1 164 aaKnown RBP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 MRGPRDQ8TDS7 321 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 AENQ8WTP8 325 aaKnown RBP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 IFT81Q8WYA0 676 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 OR8D1Q8WZ84 308 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 STMN2Q93045 179 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 BORCS5Q969J3 196 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 ABTB1Q969K4 478 aaPredicted RBP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 CREB3L1Q96BA8 519 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 ZBED6CLQ96FA7 236 aaPredicted RBP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 SDSLQ96GA7 329 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 PCED1BQ96HM7 432 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 Q96MT0 163 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 SERPINB12Q96P63 405 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 CDCA3Q99618 268 aaPredicted RBP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 DHRS9Q9BPW9 319 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 BEX2Q9BXY8 128 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 NAA50Q9GZZ1 169 aaKnown RBP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 WDR13Q9H1Z4 485 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 MFSD1Q9H3U5 465 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 RNF41Q9H4P4 317 aaPredicted RBP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 IKZF5Q9H5V7 419 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 DHX35Q9H5Z1 703 aaKnown RBP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 C6orf50Q9HD87 102 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 ABCB9Q9NP78 766 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 MYOZ1Q9NP98 299 aaPredicted RBP1.87□□□□□ -2.11
PTPN12-212ENST00000494248 FBXO8Q9NRD0 319 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 CTPS2Q9NRF8 586 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 INIPQ9NRY2 104 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 CUTCQ9NTM9 273 aa1.87□□□□□ -2.11
PTPN12-212ENST00000494248 INTS9Q9NV88 658 aaKnown RBP1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms