RNA–Protein interactions for RNA: ENST00000493695.1

SMC4-223, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-223ENST00000493695 LRRC74AQ0VAA2 488 aa2.07□□□□□ -2.08
SMC4-223ENST00000493695 MOBPQ13875 183 aa2.07□□□□□ -2.08
SMC4-223ENST00000493695 C5orf47Q569G3 176 aa2.07□□□□□ -2.08
SMC4-223ENST00000493695 FAM71E1Q6IPT2 247 aa2.07□□□□□ -2.08
SMC4-223ENST00000493695 CCDC73Q6ZRK6 1079 aa2.07□□□□□ -2.08
SMC4-223ENST00000493695 NTM-AS1Q6ZSK4 140 aa2.07□□□□□ -2.08
SMC4-223ENST00000493695 ZNF695Q8IW36 515 aa2.07□□□□□ -2.08
SMC4-223ENST00000493695 CDH26Q8IXH8 852 aa2.07□□□□□ -2.08
SMC4-223ENST00000493695 ACMSDQ8TDX5 336 aa2.07□□□□□ -2.08
SMC4-223ENST00000493695 CXorf40AQ8TE69 158 aa2.07□□□□□ -2.08
SMC4-223ENST00000493695 ELMO1Q92556 727 aa2.07□□□□□ -2.08
SMC4-223ENST00000493695 PKNOX2Q96KN3 472 aa2.07□□□□□ -2.08
SMC4-223ENST00000493695 ZNF681Q96N22 645 aa2.07□□□□□ -2.08
SMC4-223ENST00000493695 ATP5SQ99766 215 aa2.07□□□□□ -2.08
SMC4-223ENST00000493695 ZNF430Q9H8G1 570 aaPredicted RBP2.07□□□□□ -2.08
SMC4-223ENST00000493695 OR12D3Q9UGF7 316 aa2.07□□□□□ -2.08
SMC4-223ENST00000493695 MRPS18BQ9Y676 258 aaKnown RBP2.07□□□□□ -2.08
SMC4-223ENST00000493695 MROH7-TTC4A0A0A0MT08 1334 aa2.07□□□□□ -2.08
SMC4-223ENST00000493695 COL22A1Q8NFW1 1626 aaPredicted RBP2.06□□□□□ -2.08
SMC4-223ENST00000493695 IGHV5-10-1A0A0J9YXX1 117 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 ZNF705GA8MUZ8 300 aaPredicted RBP2.06□□□□□ -2.08
SMC4-223ENST00000493695 F6UB75 175 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 CTDNEP1O95476 244 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 AIFM1O95831 613 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 IGHV1-8P0DP01 117 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 CHMLP26374 656 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 GPX4P36969 197 aaPredicted RBP2.06□□□□□ -2.08
SMC4-223ENST00000493695 NAA10P41227 235 aaPredicted RBP2.06□□□□□ -2.08
SMC4-223ENST00000493695 CDKN2BP42772 138 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 ACLYP53396 1101 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 PRMT2P55345 433 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 YWHAGP61981 247 aaKnown RBP eCLIP2.06□□□□□ -2.08
SMC4-223ENST00000493695 ESRRGP62508 458 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 PRPSAP1Q14558 356 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 PON2Q15165 354 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 CHRNA6Q15825 494 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 LINC00483Q53H64 154 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 XKR7Q5GH72 579 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 ANKRD26P1Q6NSI1 321 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 BIVMQ86UB2 503 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 GTPBP8Q8N3Z3 284 aaPredicted RBP2.06□□□□□ -2.08
SMC4-223ENST00000493695 LIX1Q8N485 282 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 EID2Q8N6I1 236 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 OR56B2PQ8NGI1 322 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 DEDD2Q8WXF8 326 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 FAM3DQ96BQ1 224 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 ING2Q9H160 280 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 YTHDF2Q9Y5A9 579 aaKnown RBP2.06□□□□□ -2.08
SMC4-223ENST00000493695 ADAMTS13Q76LX8 1427 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 GPATCH8Q9UKJ3 1502 aaKnown RBP2.06□□□□□ -2.08
SMC4-223ENST00000493695 CAMTA1Q9Y6Y1 1673 aa2.06□□□□□ -2.08
SMC4-223ENST00000493695 FBN1P35555 2871 aaKnown RBP2.05□□□□□ -2.08
SMC4-223ENST00000493695 IGLV1-50A0A075B6I6 118 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 TRBV11-1A0A0K0K1C0 115 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 GLYATL1P3A0A0U1RQE8 302 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 ZNF816-ZNF321PA0A0X1KG74 233 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 HEATR9A2RTY3 570 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 GOLGA8OA6NCC3 632 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 GOLGA8NF8WBI6 632 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 MPHOSPH10O00566 681 aaKnown RBP2.05□□□□□ -2.08
SMC4-223ENST00000493695 RAB29O14966 203 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 ZNF207O43670 478 aaKnown RBP2.05□□□□□ -2.08
SMC4-223ENST00000493695 CHST1O43916 411 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 DPM1O60762 260 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 ENTPD5O75356 428 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 PRPS2P11908 318 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 CCNB1P14635 433 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 PGAM1P18669 254 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 CSNK1A1P48729 337 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 TMED10P49755 219 aaKnown RBP2.05□□□□□ -2.08
SMC4-223ENST00000493695 ACTA2P62736 377 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 ACTG2P63267 376 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 ACTC1P68032 377 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 ADARB1P78563 741 aaKnown RBP2.05□□□□□ -2.08
SMC4-223ENST00000493695 ECH1Q13011 328 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 LY6G6FQ5SQ64 297 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 SLC8B1Q6J4K2 584 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 FBXW12Q6X9E4 464 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 WDR86Q86TI4 376 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 PGAM4Q8N0Y7 254 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 OR5W2Q8NH69 310 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 ABHD3Q8WU67 409 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 GALNT14Q96FL9 552 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 LZTS2Q9BRK4 669 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 SAV1Q9H4B6 383 aaPredicted RBP2.05□□□□□ -2.08
SMC4-223ENST00000493695 ST3GAL6Q9Y274 331 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 KCNE3Q9Y6H6 103 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 PTPRTO14522 1441 aa2.05□□□□□ -2.08
SMC4-223ENST00000493695 AP3B1O00203 1094 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 BET1O15155 118 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 CLIC3O95833 236 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 BCHEP06276 602 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 ZNF250P15622 560 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 PSMC3P17980 439 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 TNNI1P19237 187 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 OTX1P32242 354 aaPredicted RBP2.04□□□□□ -2.08
SMC4-223ENST00000493695 MAS1LP35410 378 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 NAMPTP43490 491 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 CDH6P55285 790 aa2.04□□□□□ -2.08
SMC4-223ENST00000493695 KRTAP12-3P60328 96 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms