RNA–Protein interactions for RNA: ENST00000493379.1

VPS52-219, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 786 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-219ENST00000493379 RFX4Q33E94 735 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 KRTAP24-1Q3LI83 254 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 TOR2AQ5JU69 321 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 PHYHD1Q5SRE7 291 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 ZNF362Q5T0B9 420 aaPredicted RBP5.88□□□□□ -1.47
VPS52-219ENST00000493379 C10orf128Q5T292 105 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 FAM205BPQ63HN1 556 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 PGBD2Q6P3X8 592 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 NIPAL3Q6P499 406 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 ANKRD16Q6P6B7 361 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 CASP12Q6UXS9 341 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 DPY19L2P2Q6ZN68 376 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 CCDC121Q6ZUS5 278 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 FOXL2NBQ6ZUU3 175 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 RRM2BQ7LG56 351 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 BHLHA15Q7RTS1 189 aaPredicted RBP5.88□□□□□ -1.47
VPS52-219ENST00000493379 HDDC2Q7Z4H3 204 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 ARIH2OSQ8N7S6 290 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 MOSPD2Q8NHP6 518 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 ZNF519Q8TB69 540 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 GNPDA2Q8TDQ7 276 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 IGFBPL1Q8WX77 278 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 ASB10Q8WXI3 467 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 CCDC124Q96CT7 223 aaKnown RBP5.88□□□□□ -1.47
VPS52-219ENST00000493379 SNX18Q96RF0 628 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 DDOQ99489 341 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 ALG12Q9BV10 488 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 NELFAQ9H3P2 528 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 DENND2DQ9H6A0 471 aaPredicted RBP5.88□□□□□ -1.47
VPS52-219ENST00000493379 YY1AP1Q9H869 796 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 PLEKHF2Q9H8W4 249 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 MOV10Q9HCE1 1003 aaKnown RBP5.88□□□□□ -1.47
VPS52-219ENST00000493379 MED29Q9NX70 200 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 VNN3Q9NY84 501 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 B3GNT2Q9NY97 397 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 ZNF226Q9NYT6 803 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 GLTPQ9NZD2 209 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 UPB1Q9UBR1 384 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 DNAJB9Q9UBS3 223 aa5.88□□□□□ -1.47
VPS52-219ENST00000493379 ZNF346Q9UL40 294 aaKnown RBP5.88□□□□□ -1.47
VPS52-219ENST00000493379 TRRAPQ9Y4A5 3859 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 A0A1W2PRG6 482 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 A6NIZ1 184 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 ZNF726A6NNF4 738 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 ZNF99A8MXY4 864 aaPredicted RBP5.87□□□□□ -1.47
VPS52-219ENST00000493379 TNFRSF11BO00300 401 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 KPNA4O00629 521 aaPredicted RBP5.87□□□□□ -1.47
VPS52-219ENST00000493379 CLOCKO15516 846 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 PHF1O43189 567 aaPredicted RBP5.87□□□□□ -1.47
VPS52-219ENST00000493379 RNF13O43567 381 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 TRMUO75648 421 aaKnown RBP5.87□□□□□ -1.47
VPS52-219ENST00000493379 NDUFB2O95178 105 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 CST1P01037 141 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 IGLV1-44P01699 117 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 ACADSP16219 412 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 DAP3P51398 398 aaKnown RBP5.87□□□□□ -1.47
VPS52-219ENST00000493379 BIDP55957 195 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 CTXN1P60606 82 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 RAP1BP61224 184 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 RAP1AP62834 184 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 SPIBQ01892 262 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 GABPB1Q06547 395 aaPredicted RBP5.87□□□□□ -1.47
VPS52-219ENST00000493379 CCNIQ14094 377 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 TAB1Q15750 504 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 EXOC3L2Q2M3D2 409 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 ALG10Q5BKT4 473 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 THEM4Q5T1C6 240 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 NCMAPQ5T1S8 102 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 CD276Q5ZPR3 534 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 GPR139Q6DWJ6 353 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 PPP4R4Q6NUP7 873 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 RPL13AP3Q6NVV1 102 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 SLC25A47Q6Q0C1 308 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 RASSF6Q6ZTQ3 369 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 NANOGNBQ7Z5D8 188 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 TMEM179BQ7Z7N9 219 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 C10orf53Q8N6V4 93 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 OR1K1Q8NGR3 316 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 OR52J3Q8NH60 311 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 OR51A7Q8NH64 312 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 ZNF566Q969W8 418 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 S100PBPQ96BU1 408 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 FOXB1Q99853 325 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 EMC6Q9BV81 110 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 ACTR6Q9GZN1 396 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 CRLF2Q9HC73 371 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 KRCC1Q9NPI7 259 aaPredicted RBP5.87□□□□□ -1.47
VPS52-219ENST00000493379 SLC17A5Q9NRA2 495 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 VSX1Q9NZR4 365 aaPredicted RBP5.87□□□□□ -1.47
VPS52-219ENST00000493379 C6orf203Q9P0P8 240 aaPredicted RBP5.87□□□□□ -1.47
VPS52-219ENST00000493379 ST6GALNAC2Q9UJ37 374 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 TMCC3Q9ULS5 477 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 EDARQ9UNE0 448 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 MGAT4BQ9UQ53 548 aa5.87□□□□□ -1.47
VPS52-219ENST00000493379 PRR14LQ5THK1 2151 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 TRAV27A0A087WT01 109 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 A0A1W2PPR1 153 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 DPRXA6NFQ7 191 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 UNC119BA6NIH7 251 aa5.86□□□□□ -1.47
VPS52-219ENST00000493379 MCIDASD6RGH6 385 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms