RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, human

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SAMM50-204	ENST00000493161	TANC2	Q9HCD6	1990 aa		11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	VWF	P04275	2813 aa		11.55	□□□□□ -0.56
SAMM50-204	ENST00000493161	PLSCR5	A0PG75	271 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	FOXH1	O75593	365 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	IGHM	P01871	453 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	HIST1H2AB	P04908	130 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	RNASE1	P07998	156 aa	Known RBP	11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	ADH4	P08319	380 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	ACADS	P16219	412 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	ZNF12	P17014	697 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	MDK	P21741	143 aa	Predicted RBP	11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	PPIB	P23284	216 aa	Known RBP	11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	OMG	P23515	440 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	MRPL19	P49406	292 aa	Known RBP	11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	ZNF133	P52736	654 aa	Predicted RBP	11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	ERVK-25	P63136	954 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	PSG4	Q00888	419 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	SRSF4	Q08170	494 aa	Known RBP	11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	SELPLG	Q14242	412 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	SLC9A3R2	Q15599	337 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	C10orf128	Q5T292	105 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	LEG1	Q6P5S2	330 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	DLEU7	Q6UYE1	221 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	HIST3H2A	Q7L7L0	130 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	NANOGNB	Q7Z5D8	188 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	MOSPD2	Q8NHP6	518 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	ABHD4	Q8TB40	342 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	NSMAF	Q92636	917 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	HIST1H2AC	Q93077	130 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	NMD3	Q96D46	503 aa	Known RBP	11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	TRIM44	Q96DX7	344 aa	Predicted RBP	11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	EBF4	Q9BQW3	602 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	WNT5B	Q9H1J7	359 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	SIAE	Q9HAT2	523 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	CCNB1IP1	Q9NPC3	277 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	ANGPT4	Q9Y264	503 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	INSIG2	Q9Y5U4	225 aa		11.54	□□□□□ -0.56
SAMM50-204	ENST00000493161	TRAPPC13	A5PLN9	417 aa		11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	CD55	P08174	381 aa		11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	IGHV4-38-2	P0DP08	117 aa		11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	CD247	P20963	164 aa		11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	AQP2	P41181	271 aa		11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	SLC6A9	P48067	706 aa		11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	GDI2	P50395	445 aa	Known RBP	11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	STX1B	P61266	288 aa		11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	PPP1CB	P62140	327 aa		11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	MRPS34	P82930	218 aa	Known RBP	11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	TNFAIP6	P98066	277 aa	Predicted RBP	11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	SLC3A1	Q07837	685 aa		11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	ZMYND11	Q15326	602 aa		11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	SGCA	Q16586	387 aa		11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	RUNDC3A	Q59EK9	446 aa		11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	ARMC4	Q5T2S8	1044 aa		11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	CLDN22	Q8N7P3	220 aa		11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	PFN4	Q8NHR9	129 aa		11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	HDAC2	Q92769	488 aa	Known RBP	11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	GPA33	Q99795	319 aa		11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	EGLN1	Q9GZT9	426 aa		11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	POFUT1	Q9H488	388 aa		11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	EVA1A	Q9H8M9	152 aa		11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	PATZ1	Q9HBE1	687 aa	Known RBP	11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	C20orf141	Q9NUB4	165 aa		11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	TMEM106B	Q9NUM4	274 aa		11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	EIF3K	Q9UBQ5	218 aa	Known RBP	11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	POLR3K	Q9Y2Y1	108 aa	Predicted RBP	11.53	□□□□□ -0.56
SAMM50-204	ENST00000493161	MDFIC2	A0A1B0GVS7	189 aa		11.52	□□□□□ -0.57
SAMM50-204	ENST00000493161		A0A1W2PRG6	482 aa		11.52	□□□□□ -0.57
SAMM50-204	ENST00000493161	EVPLL	A8MZ36	301 aa		11.52	□□□□□ -0.57
SAMM50-204	ENST00000493161	MCIDAS	D6RGH6	385 aa		11.52	□□□□□ -0.57
SAMM50-204	ENST00000493161	GPANK1	O95872	356 aa		11.52	□□□□□ -0.57
SAMM50-204	ENST00000493161	CD80	P33681	288 aa		11.52	□□□□□ -0.57
SAMM50-204	ENST00000493161	IDH3A	P50213	366 aa		11.52	□□□□□ -0.57
SAMM50-204	ENST00000493161	CRYBA2	P53672	197 aa		11.52	□□□□□ -0.57
SAMM50-204	ENST00000493161	IL13RA1	P78552	427 aa		11.52	□□□□□ -0.57
SAMM50-204	ENST00000493161	PSG7	Q13046	419 aa		11.52	□□□□□ -0.57
SAMM50-204	ENST00000493161	AGK	Q53H12	422 aa		11.52	□□□□□ -0.57
SAMM50-204	ENST00000493161		Q6ZR03	302 aa		11.52	□□□□□ -0.57
SAMM50-204	ENST00000493161	NKAIN4	Q8IVV8	208 aa		11.52	□□□□□ -0.57
SAMM50-204	ENST00000493161	TAMM41	Q96BW9	452 aa		11.52	□□□□□ -0.57
SAMM50-204	ENST00000493161	SIGLEC11	Q96RL6	698 aa		11.52	□□□□□ -0.57
SAMM50-204	ENST00000493161	OR2H1	Q9GZK4	316 aa		11.52	□□□□□ -0.57
SAMM50-204	ENST00000493161	KCNN2	Q9H2S1	579 aa		11.52	□□□□□ -0.57
SAMM50-204	ENST00000493161	INIP	Q9NRY2	104 aa		11.52	□□□□□ -0.57
SAMM50-204	ENST00000493161	CYSLTR2	Q9NS75	346 aa		11.52	□□□□□ -0.57
SAMM50-204	ENST00000493161	ZDHHC8	Q9ULC8	765 aa		11.52	□□□□□ -0.57
SAMM50-204	ENST00000493161	POM121C	A8CG34	1229 aa		11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161		F5H0A9	414 aa	Predicted RBP	11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161	ERLIN1	O75477	346 aa		11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161	OR7A10	O76100	309 aa		11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161	FUT1	P19526	365 aa		11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161	LAP3	P28838	519 aa		11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161	MTPN	P58546	118 aa		11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161	PAX8	Q06710	450 aa		11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161	CDK5R2	Q13319	367 aa		11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161	LAPTM4A	Q15012	233 aa		11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161	ZNF774	Q6NX45	483 aa		11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161	SLC25A47	Q6Q0C1	308 aa		11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161	LRRC28	Q86X40	367 aa	Predicted RBP	11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161	KLHL36	Q8N4N3	616 aa		11.51	□□□□□ -0.57
SAMM50-204	ENST00000493161	ZNF283	Q8N7M2	679 aa		11.51	□□□□□ -0.57

Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms